XLOC_008879 (nudt8)


Basic Information

Item Value
gene id XLOC_008879
gene name nudt8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 499848 ~ 506010 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017542
CTGTCACAACATCCTTCAGACGTCATCGTGCTGATTATGTGTTATTTTAAGgatgTTCAGCACTCCGCATGTGAAGGCCTGTGTGAATCTGCTGTGGGTTCACAGACTGTCTCTCAGAGATGCTCATATTCATCTCCAGAACAGACACTTCTGCTCCAGATCTGCTCTCACTCCTCCTCATAGATGTATTTCTGCAGTGTCAGGATCTTCTGAATACTCCCGGACATGCATTAGCACTCGTTTGCTTTTAGCACGCATGAACTTCAGCTGTGTACACTCAACGAACTCTGTCCTGCTGTTTGCACACCGCAGTTTGACTGCGTCTCCATCAGCGCTCTCCACTATAGTGAGTCCTGAAGGCTGCACGGGGAGACACACACACCGCTGGGGTCTAAATCAGCAGTCGTGTGTTAGCATTAGTGCAGGTCATGTGTGCGCTGAGAGCCGACCCGCAGTGTTTGCGATTCAGAGACGCAGACTGCACAGAAACGCACAGTTTGAGGAGTGTGTGTCTGCGCTGAACGAGGCGCGCTGCAGACGCTCGCTGCAGGCCAACGCTGCGCTGTACGAGCGGGACACACACCGCTGGGCCGCGGTgctggtgtgtctgtgtgtgtcacgTGGAGATCCAGCGCTGCTCTTCACACTCAGATCTGCACAGCTGAAGGGCAGACACAAAGGAGACGTCAGCTTTGCAGGAGGAAAGAAGGACCcgtcagacagaactgttgtggaTACGGCGCTCAGAGAGGCCGCTGAAGAGCTGGGAATCCACATCCCTGAGGAGAAGGTGTGGGGTGTGCTGAAACCCCTGCGGGATAAGTCTGGAATGATGATAGCGCCAGTAATAGCCAACATCGGCCCACTGGAGGCGCTCTCTTTCCAGCCGAACCCCAGTGAGGTGGAGGAGATTTTCACCCTGACTCTGGAGCATTTGTGTGAGCCCCGGAACCGAGGATACACACACTTCCGCACGGGTGAGCGTTACGGGTACACACTGCCTGTGTTTCTCAGCCCGAAGCACCGGGTCTGGGGTCTGACAGCGGTGGCTCTGGATCAGGCTCTGAAACTCATCGTCCCACCAGAGCAGATGCTGGAGCGCAGAGTaatacagcagcagcagcagcgggaCGCTTCATAAACACACAggtcacacacacattcagctgcAGGAATGAAATATGGGTCATATTTGAGCAATAAACAAAAGGGATCAAGCGGTTCTGCTGTCACTGGGGCAGCCACACTGCAAAACAGGCTGTTCTTACTGAGAGTTTCTGTCTGGTTTCaagtccaaacatctaaaaactcttaaattaatAAGCGTTTTCTAGACATATAGTGTTGTTTTCaggaataatgagtcaaaataaagagagattctccttaaaacaagcagaataatctgacaattGTTTTGGATTTGAAATGACACTATTTCTCTTCCGCATTGgtagattattctgcttgttgtAATGTAAAGCTCTAGTTCAGGCTTCACGTCTCTCTCTGTCACATTGGCAAGATTTTGATAATTATGAGTTCTGCACTTTATCCCAttattgtaaaaacattttaaagctgcAGTCTGTAACTTTTATTTGCTTCTCTGAAATAAATGTTTGAGTTCATG

Function

symbol description
nudt8 Predicted to enable hydrolase activity. Orthologous to human NUDT8 (nudix hydrolase 8).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-219 Predicted to enable hydrolase activity. Orthologous to human NUDT8 (nudix hydrolase 8).

Ensembl:

ensembl_id ENSDARG00000007722

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017542 True 1633 mRNA 0.49 5 499848 506010

Neighbor

gene id symbol gene type direction distance location
XLOC_008878 mfrp coding downstream 22625 464229 ~ 477223 (-)
XLOC_008877 CABZ01033205.1 coding downstream 37065 454349 ~ 462783 (-)
XLOC_008876 CABZ01033206.1 coding downstream 47501 449097 ~ 452347 (-)
XLOC_008875 CABZ01056629.1 coding downstream 63318 433035 ~ 436530 (-)
XLOC_008874 NA coding downstream 70201 428419 ~ 429647 (-)
XLOC_008880 tagln coding upstream 37734 543744 ~ 551181 (-)
XLOC_008881 cbln18 coding upstream 50946 556956 ~ 568645 (-)
XLOC_008882 cbln20 coding upstream 66185 572195 ~ 576135 (-)
XLOC_008883 si:ch73-144d13.5 coding upstream 80595 586605 ~ 604353 (-)
XLOC_008884 si:ch73-144d13.7 coding upstream 105219 611229 ~ 617797 (-)
XLOC_008873 CABZ01056628.1 non-coding downstream 74092 425695 ~ 425756 (-)
XLOC_008871 NA non-coding downstream 121661 374380 ~ 378187 (-)
XLOC_008870 FP102887.1 non-coding downstream 150281 349451 ~ 349567 (-)
XLOC_008869 BX640522.2 non-coding downstream 209341 282731 ~ 290507 (-)
XLOC_008885 NA non-coding upstream 116699 622709 ~ 633408 (-)
XLOC_008893 NA non-coding upstream 307086 813096 ~ 815019 (-)
XLOC_008894 NA non-coding upstream 312181 818191 ~ 848462 (-)
XLOC_008895 NA non-coding upstream 331005 837015 ~ 848792 (-)
XLOC_008896 NA non-coding upstream 363951 869961 ~ 909037 (-)

Expression


Co-expression Network