G158566


Basic Information

Item Value
gene id G158566
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2656973 ~ 2657187 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU180039
GTTTTCTCAACTTCACTTTGAAAAAATAGTTATATATATTTCTAAATTAGCATTTTTGAGTATTTACTTATTTTCTTTGACATAAAATTCAGTTTATTGTGATGCATACTTTTTAGTATATAACCATTACATTTTATGCTGTGTACATCTCTCAAACCCCAGTCCACACTGTTGCACTGGTGCTACTTTCCCTATAAATCTTAAGCATATGCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180039 True 215 lncRNA 0.30 1 2656973 2657187

Neighbor

gene id symbol gene type direction distance location
CI01000030_02641511_02650047 CILP2 coding upstream 6434 2641045 ~ 2650539 (+)
CI01000030_02620111_02632697 YJEFN3 coding upstream 24251 2620111 ~ 2632722 (+)
CI01000030_02573116_02582804 GATAD2A coding upstream 74161 2573116 ~ 2582812 (+)
CI01000030_02531026_02532411 NA coding upstream 122741 2530509 ~ 2534232 (+)
CI01000030_02472528_02477483 NA coding upstream 179490 2472528 ~ 2477483 (+)
CI01000030_02678940_02684491 NA coding downstream 21753 2678940 ~ 2684591 (+)
CI01000030_02705058_02731134 NA coding downstream 44624 2701811 ~ 2731151 (+)
CI01000030_02843446_02856037 CBARPB coding downstream 186259 2843446 ~ 2856216 (+)
CI01000030_02891265_02897170 FSTL3 coding downstream 233924 2891111 ~ 2898442 (+)
CI01000030_02911153_02916952 NA coding downstream 252213 2909400 ~ 2916952 (+)
G158434 NA non-coding upstream 1425 2655275 ~ 2655548 (+)
G158436 NA non-coding upstream 3867 2652644 ~ 2653106 (+)
G158555 NA non-coding upstream 209521 2447009 ~ 2447452 (+)
G158548 NA non-coding upstream 230198 2426494 ~ 2426775 (+)
G158567 NA non-coding downstream 1075 2658262 ~ 2658521 (+)
G158398 NA non-coding downstream 30356 2687543 ~ 2690341 (+)
G158585 NA non-coding downstream 49761 2706948 ~ 2707161 (+)
G158660 NA non-coding downstream 219556 2876743 ~ 2876995 (+)
G158416 NA other upstream 42680 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 374603 2277208 ~ 2282743 (+)
G157726 NA other upstream 1018746 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1650286 1003114 ~ 1003795 (+)
G157227 NA other upstream 2300490 327649 ~ 356483 (+)
CI01000030_03018776_03042194 FGF22 other downstream 356269 3018776 ~ 3043773 (+)
G159685 NA other downstream 1774613 4431800 ~ 4488526 (+)
G159816 NA other downstream 1859591 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4542748 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 5196898 7868292 ~ 7886228 (+)

Expression


Co-expression Network