G158585


Basic Information

Item Value
gene id G158585
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2706948 ~ 2707161 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU180063
GAAAAATATCCATATTTAAAACTTTATAAATTCAAATAACTAGTTTCTGGTGGACGACCGTACACATACTGCGCAAGTCGACTTGCGCCAAATGAGTAACCCCTGAAGCAATGTATGATGCAGGAAATTAGGAGTATTGTAAGCTTAGACGATTCTCGCGGTAGAAACAAATAGGGCTGTGCAACAAACTCAAGCTCCTCTTCTCTTATATCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180063 True 214 lncRNA 0.39 1 2706948 2707161

Neighbor

gene id symbol gene type direction distance location
CI01000030_02678940_02684491 NA coding upstream 22357 2678940 ~ 2684591 (+)
CI01000030_02641511_02650047 CILP2 coding upstream 56409 2641045 ~ 2650539 (+)
CI01000030_02620111_02632697 YJEFN3 coding upstream 74226 2620111 ~ 2632722 (+)
CI01000030_02573116_02582804 GATAD2A coding upstream 124136 2573116 ~ 2582812 (+)
CI01000030_02531026_02532411 NA coding upstream 172716 2530509 ~ 2534232 (+)
CI01000030_02843446_02856037 CBARPB coding downstream 136285 2843446 ~ 2856216 (+)
CI01000030_02891265_02897170 FSTL3 coding downstream 183950 2891111 ~ 2898442 (+)
CI01000030_02911153_02916952 NA coding downstream 202239 2909400 ~ 2916952 (+)
CI01000030_02919390_02954905 HCN2B, HCN2 coding downstream 212229 2919390 ~ 2955425 (+)
CI01000030_03018776_03042194 FGF22 coding downstream 311615 3018776 ~ 3043773 (+)
CI01000030_02705058_02731134 NA non-coding upstream 2907 2701811 ~ 2731151 (+)
G158398 NA non-coding upstream 16607 2687543 ~ 2690341 (+)
G158567 NA non-coding upstream 48427 2658262 ~ 2658521 (+)
G158566 NA non-coding upstream 49761 2656973 ~ 2657187 (+)
G158434 NA non-coding upstream 51400 2655275 ~ 2655548 (+)
G158660 NA non-coding downstream 169582 2876743 ~ 2876995 (+)
G158664 NA non-coding downstream 174680 2881841 ~ 2882156 (+)
G158676 NA non-coding downstream 201134 2908295 ~ 2908516 (+)
G158681 NA non-coding downstream 261496 2968657 ~ 2970230 (+)
CI01000030_03139836_03149991 NA non-coding downstream 442637 3139836 ~ 3150010 (+)
G158416 NA other upstream 92655 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 424578 2277208 ~ 2282743 (+)
G157726 NA other upstream 1068721 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1700261 1003114 ~ 1003795 (+)
G157227 NA other upstream 2350465 327649 ~ 356483 (+)
G159685 NA other downstream 1724639 4431800 ~ 4488526 (+)
G159816 NA other downstream 1809617 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4492774 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 5146924 7868292 ~ 7886228 (+)

Expression


Co-expression Network