G158676


Basic Information

Item Value
gene id G158676
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2908295 ~ 2908516 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU180158
GGATCATGATGCAGAACCAAAAACCCCGCAATTTTCAGTATATTATAATACGGAAAAGTTTAAATGTATAATTTTAAATGTATAAATGATATCAAATGTATTGTTTTGGAGGATTTCCGTACATTATACTCACAAAACGCGTTTTGGTTAGTTACAATGACAGAGCCTGCAATTTTCTGAAAATCAAAGATGTCGAAATAATTTTGAAACTTTACATACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180158 True 222 lncRNA 0.30 1 2908295 2908516

Neighbor

gene id symbol gene type direction distance location
CI01000030_02891265_02897170 FSTL3 coding upstream 9853 2891111 ~ 2898442 (+)
CI01000030_02843446_02856037 CBARPB coding upstream 52079 2843446 ~ 2856216 (+)
CI01000030_02705058_02731134 NA coding upstream 177144 2701811 ~ 2731151 (+)
CI01000030_02678940_02684491 NA coding upstream 223704 2678940 ~ 2684591 (+)
CI01000030_02641511_02650047 CILP2 coding upstream 257756 2641045 ~ 2650539 (+)
CI01000030_02911153_02916952 NA coding downstream 884 2909400 ~ 2916952 (+)
CI01000030_02919390_02954905 HCN2B, HCN2 coding downstream 10874 2919390 ~ 2955425 (+)
CI01000030_03018776_03042194 FGF22 coding downstream 110260 3018776 ~ 3043773 (+)
CI01000030_03058744_03059657 NA coding downstream 147355 3055871 ~ 3059667 (+)
CI01000030_03060378_03062683 NA coding downstream 151811 3060327 ~ 3063096 (+)
G158664 NA non-coding upstream 26139 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 31300 2876743 ~ 2876995 (+)
G158585 NA non-coding upstream 201134 2706948 ~ 2707161 (+)
G158398 NA non-coding upstream 217954 2687543 ~ 2690341 (+)
G158681 NA non-coding downstream 60141 2968657 ~ 2970230 (+)
CI01000030_03139836_03149991 NA non-coding downstream 241282 3139836 ~ 3150010 (+)
G158767 NA non-coding downstream 254727 3163243 ~ 3163472 (+)
CI01000030_03172301_03180142 NA non-coding downstream 263978 3172255 ~ 3180536 (+)
G158774 NA non-coding downstream 298482 3206998 ~ 3207286 (+)
G158416 NA other upstream 294002 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 625925 2277208 ~ 2282743 (+)
G157726 NA other upstream 1270068 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1901608 1003114 ~ 1003795 (+)
G157227 NA other upstream 2551812 327649 ~ 356483 (+)
G159685 NA other downstream 1523284 4431800 ~ 4488526 (+)
G159816 NA other downstream 1608262 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4291419 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4945569 7868292 ~ 7886228 (+)

Expression


Co-expression Network