XLOC_008881 (cbln18)


Basic Information

Item Value
gene id XLOC_008881
gene name cbln18
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 556956 ~ 568645 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017545
ACTCCGCTCCTCTGCTCCTGATCACAGGCGGTGTTGTTCTGCAGTGTGAGGATGAAGACTCTTGTGTGTGTCTGGATGATGATCTGTCTCTGCTGCTGTGCTGAAGCCGCGGCCTCTGACCTCCTGCGGGACAGTGCTGTGAGCTGGCTGGGAGCTCTGCCGTGCGGCAGCTGGGACTGTGAGTGTGCGTTCAGTAAACTGCAGGGCTGCTGCTGTGTCTCCAGCGCTCTGGATGATCTGGAGCAGGCCACCTTCATCCGCATGATGGGCTTATGGGACGGCCTGATGCGCCTCAACACACAAGTCCAGGACATCACAGCTGGCTGTAAGATAGCCTTCACCGCTGCCATGCTGCCCATGAGTGGGTGTTTCGGGCCTTTCACCAGCAACATGTCCATCTCTTACCAGTCTGTCTCGCTCAATCAGGGGAACGGCTACAATCCTGCGCTGGGCGTGTTCACGGCACCCCACGCAGGCCTGTACTCCTTCTCCTTCACGGTGTACTCCAAACCGGGCAGCTCCGGCGAGCGGCTGTACCAGAAGCTGCAGCTGGTGAAGGATGGGACGGTGCTGGCCTCGTCCTGGGAGGATAACCGTGAGGACTCGGAGGACAGCAGCTCTCAGACGCTCCTGCTGCAGCTCAGACGGGGCTGTCAGGTCTACATGGAGCTGCTGTCCGGACGGCAGATCTGCGGAGACACACAGGGCCTCAACACCTTCAGCGGATTCCTCATCTACCCCTCCTCTGATGAGCTGGgcaactaacacacacacacacacacacacacacacacacacacatacagtacagtgcaAAAGTCTTAATCCACTACCAGCTCTGGGAGATTAAAGCTATGGAGCAGGTGCAGGGTCAATACTTTTGGCTGAATTAT
>TCONS_00017546
tagcaataataataataataataataataacaataataataataataataatatcaataataatcatggtggggcagtgggtagcatgatcacctcacagcaagaaggtcgctggttcgaacctcgactgcatcacttggcatttctgtgttaagtttgcatgttctcctcgtgttggcgtgggtttcctccacagtctgaacacatgcactataggggaatccAATAAGCTAAataagtgtgtgaatgcaagagtgtatgggtgtttcccagtgatgggttgcagctggaagggtattcccaattcagtataaataaccaaaagCATTTTACCTTAGTCattttcgtcttgaagaatccttCCCTCCACCCCCCTCTCCTCCTCTCTTTCCTctatagggcagcacggcggcccagtggctagcactgtggcttcacagcaagaatgcctcctCTCTGGGTCTCTAcccggccagttggcatttctgtgcggagttcatgttctccccgagctcgcgtgggttttctccgggtcctctggtttcaatccaaaacatgagacataagtAAATCACCTAAACCAAATAGTCAAACTCCACCAGCAGCTCACCCTTAAGCAGCAGGGGCAGTATTGACAGGCGGGTGACATTGAAATGCTCTGTAGAGAGGGAGAATGTAATCAAACACCCTGCAGTGATGATGCACAATGTGAATTTGTGAATGCGTTGTGTTCTTCAGGGCGGTGTTGTTCTGCAGTGTGAGGATGAAGACTCTTGTGTGTGTCTGGATGATGATCTGTCTCTGCTGCTGTGCTGAAGCCGCGGCCTCTGACCTCCTGCGGGACAGTGCTGTGAGCTGGCTGGGAGCTCTGCCGTGCGGCAGCTGGGACTGTGAGTGTGCGTTCAGTAAACTGCAGGGCTGCTGCTGTGTCTCCAGCGCTCTGGATGATCTGGAGCAGGCCACCTTCATCCGCATGATGGGCTTATGGGACGGCCTGATGCGCCTCAACACACAAGTCCAGGACATCACAGCTGGCTGTAAGATAGCCTTCACCGCTGCCATGCTGCCCATGAGTGGGTGTTTCGGGCCTTTCACCAGCAACATGTCCATCTCTTACCAGTCTGTCTCGCTCAATCAGGGGAACGGCTACAATCCTGCGCTGGGCGTGTTCACGGCACCCCACGCAGGCCTGTACTCCTTCTCCTTCACGGTGTACTCCAAACCGGGCAGCTCCGGCGAGCGGCTGTACCAGAAGCTGCAGCTGGTGAAGGATGGGACGGTGCTGGCCTCGTCCTGGGAGGATAACCGTGAGGACTCGGAGGACAGCAGCTCTCAGACGCTCCTGCTGCAGCTCAGACGGGGCTGTCAGGTCTACATGGAGCTGCTGTCCGGACGGCAGATCTGCGGAGACACACAGGGCCTCAACACCTTCAGCGGATTCCTCATCTACCCCTCCTCTGATGAGCTGGgcaactaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-111109-3 No description available

Ensembl:

ensembl_id ENSDARG00000090969

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017545 False 893 mRNA 0.57 5 556956 568645
TCONS_00017546 True 1477 mRNA 0.52 4 557084 563877

Neighbor

gene id symbol gene type direction distance location
XLOC_008880 tagln coding downstream 5775 543744 ~ 551181 (-)
XLOC_008879 nudt8 coding downstream 50946 499848 ~ 506010 (-)
XLOC_008878 mfrp coding downstream 79733 464229 ~ 477223 (-)
XLOC_008877 CABZ01033205.1 coding downstream 94173 454349 ~ 462783 (-)
XLOC_008876 CABZ01033206.1 coding downstream 104609 449097 ~ 452347 (-)
XLOC_008882 cbln20 coding upstream 3550 572195 ~ 576135 (-)
XLOC_008883 si:ch73-144d13.5 coding upstream 17960 586605 ~ 604353 (-)
XLOC_008884 si:ch73-144d13.7 coding upstream 42584 611229 ~ 617797 (-)
XLOC_008885 NA coding upstream 54064 622709 ~ 633408 (-)
XLOC_008886 si:ch211-210b2.4 coding upstream 79209 647854 ~ 660394 (-)
XLOC_008874 NA non-coding downstream 127309 428419 ~ 429647 (-)
XLOC_008873 CABZ01056628.1 non-coding downstream 131200 425695 ~ 425756 (-)
XLOC_008871 NA non-coding downstream 178769 374380 ~ 378187 (-)
XLOC_008870 FP102887.1 non-coding downstream 207389 349451 ~ 349567 (-)
XLOC_008869 BX640522.2 non-coding downstream 266449 282731 ~ 290507 (-)
XLOC_008893 NA non-coding upstream 244451 813096 ~ 815019 (-)
XLOC_008894 NA non-coding upstream 249546 818191 ~ 848462 (-)
XLOC_008895 NA non-coding upstream 268370 837015 ~ 848792 (-)
XLOC_008896 NA non-coding upstream 301316 869961 ~ 909037 (-)

Expression


Co-expression Network