G158767


Basic Information

Item Value
gene id G158767
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3163243 ~ 3163472 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU180259
GTATGATGTTCCTGAAACATTCTTTCAATCATTCATACACCTGCTGTGAACAAGCACTGAAAGAAAGAGAAATAAAAACACAAACTAACTTTCTTCAGCCACAGCCTTAGATGAACTGAAGATAAAAGACATTAAATCTCTGAAGATCTGATTAAACAACTCCACAAACAGCATTACCAGCTTCACTTATTACTAACCAGACTGACTTTATTTCTGTCACACGTCTACAG

Function

NR:

description
PREDICTED: COP9 signalosome complex subunit 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180259 True 230 lncRNA 0.36 1 3163243 3163472

Neighbor

gene id symbol gene type direction distance location
CI01000030_03157804_03158397 NA coding upstream 3916 3157633 ~ 3159327 (+)
CI01000030_03139836_03149991 NA coding upstream 13252 3139836 ~ 3150010 (+)
CI01000030_03132339_03134173 NA coding upstream 28926 3132292 ~ 3134317 (+)
CI01000030_03129738_03130913 NA coding upstream 31675 3129630 ~ 3131568 (+)
CI01000030_03110702_03118217 NA coding upstream 44833 3110155 ~ 3118410 (+)
CI01000030_03172301_03180142 NA coding downstream 8783 3172255 ~ 3180536 (+)
CI01000030_03185116_03188245 NA coding downstream 21599 3185071 ~ 3188312 (+)
CI01000030_03196185_03200757 NA coding downstream 32076 3195548 ~ 3200805 (+)
CI01000030_03202618_03204279 NA coding downstream 39101 3202573 ~ 3205060 (+)
CI01000030_03218927_03220573 HSD11B1LA coding downstream 55455 3218927 ~ 3221005 (+)
G158681 NA non-coding upstream 193013 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 254727 2908295 ~ 2908516 (+)
G158664 NA non-coding upstream 281087 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 286248 2876743 ~ 2876995 (+)
G158774 NA non-coding downstream 43526 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 48311 3211783 ~ 3212301 (+)
G159234 NA non-coding downstream 78024 3241496 ~ 3241775 (+)
CI01000030_03238201_03242662 NA non-coding downstream 78739 3237992 ~ 3242902 (+)
CI01000030_03018776_03042194 FGF22 other upstream 119470 3018776 ~ 3043773 (+)
G158416 NA other upstream 548950 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 880873 2277208 ~ 2282743 (+)
G157726 NA other upstream 1525016 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2156556 1003114 ~ 1003795 (+)
G159685 NA other downstream 1268328 4431800 ~ 4488526 (+)
G159816 NA other downstream 1353306 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4036463 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4690613 7868292 ~ 7886228 (+)
G162088 NA other downstream 5074493 8237965 ~ 8239604 (+)

Expression


Co-expression Network