G159234


Basic Information

Item Value
gene id G159234
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3241496 ~ 3241775 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU180791
TTTAAGAAGACAATGTAGAAGCTGTATGGACTACTTTTCTGATGTTTTCAACCTTTTAGAAGCTGTACAATTCCTTGTATTCGTGTTCATTGTGCCAGCTCAGACATTGTGCTAAACATCTTTTGTGTTCCACAGAAGAAAGGAAAAAATGCATGCAGGTAGGAACAAATAAATAATGACAATTTTCTTTTAAAGTGAATTATTTCTTTAACAAATAAAATCAAGCAACTTTGCTTGTAGTGTCCTTAAAATGAGGTTCATGTACATAGACAGAAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180791 True 280 lncRNA 0.32 1 3241496 3241775

Neighbor

gene id symbol gene type direction distance location
CI01000030_03229393_03232355 NA coding upstream 9042 3229281 ~ 3232454 (+)
CI01000030_03218927_03220573 HSD11B1LA coding upstream 20491 3218927 ~ 3221005 (+)
CI01000030_03202618_03204279 NA coding upstream 36436 3202573 ~ 3205060 (+)
CI01000030_03196185_03200757 NA coding upstream 40691 3195548 ~ 3200805 (+)
CI01000030_03185116_03188245 NA coding upstream 53184 3185071 ~ 3188312 (+)
CI01000030_03253246_03261669 RGMD coding downstream 11471 3253246 ~ 3261943 (+)
CI01000030_03565934_03569916 EEF2B, EEF2L2, EEF2.1.L, EF2, EEF2 coding downstream 324010 3565785 ~ 3570730 (+)
CI01000030_03580764_03584676 HMG20B coding downstream 338989 3580764 ~ 3585255 (+)
CI01000030_03594936_03629403 UNC13A coding downstream 353161 3594936 ~ 3629485 (+)
CI01000030_03703231_03704355 NA coding downstream 460398 3701601 ~ 3704615 (+)
G158766 NA non-coding upstream 29195 3211783 ~ 3212301 (+)
G158774 NA non-coding upstream 34210 3206998 ~ 3207286 (+)
CI01000030_03172301_03180142 NA non-coding upstream 63532 3172255 ~ 3180536 (+)
G158767 NA non-coding upstream 78024 3163243 ~ 3163472 (+)
CI01000030_03139836_03149991 NA non-coding upstream 91486 3139836 ~ 3150010 (+)
CI01000030_03238201_03242662 NA non-coding downstream 436 3237992 ~ 3242902 (+)
G159261 NA non-coding downstream 75186 3316961 ~ 3317302 (+)
G159417 NA non-coding downstream 289022 3530797 ~ 3531025 (+)
G159418 NA non-coding downstream 289559 3531334 ~ 3531604 (+)
G159420 NA non-coding downstream 291018 3532793 ~ 3533268 (+)
CI01000030_03018776_03042194 FGF22 other upstream 197723 3018776 ~ 3043773 (+)
G158416 NA other upstream 627203 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 959126 2277208 ~ 2282743 (+)
G157726 NA other upstream 1603269 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2234809 1003114 ~ 1003795 (+)
G159685 NA other downstream 1190025 4431800 ~ 4488526 (+)
G159816 NA other downstream 1275003 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3958160 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4612310 7868292 ~ 7886228 (+)
G162088 NA other downstream 4996190 8237965 ~ 8239604 (+)

Expression


Co-expression Network