Gene
RNA
| Item | Value |
|---|---|
| gene id | G159261 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 3316961 ~ 3317302 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU180828 | True | 269 | lncRNA | 0.29 | 2 | 3316961 | 3317302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_03253246_03261669 | RGMD | coding | upstream | 55018 | 3253246 ~ 3261943 (+) |
| CI01000030_03238201_03242662 | NA | coding | upstream | 74059 | 3237992 ~ 3242902 (+) |
| CI01000030_03229393_03232355 | NA | coding | upstream | 84507 | 3229281 ~ 3232454 (+) |
| CI01000030_03218927_03220573 | HSD11B1LA | coding | upstream | 95956 | 3218927 ~ 3221005 (+) |
| CI01000030_03202618_03204279 | NA | coding | upstream | 111901 | 3202573 ~ 3205060 (+) |
| CI01000030_03565934_03569916 | EEF2B, EEF2L2, EEF2.1.L, EF2, EEF2 | coding | downstream | 248483 | 3565785 ~ 3570730 (+) |
| CI01000030_03580764_03584676 | HMG20B | coding | downstream | 263462 | 3580764 ~ 3585255 (+) |
| CI01000030_03594936_03629403 | UNC13A | coding | downstream | 277634 | 3594936 ~ 3629485 (+) |
| CI01000030_03703231_03704355 | NA | coding | downstream | 384871 | 3701601 ~ 3704615 (+) |
| CI01000030_03715463_03716370 | NA | coding | downstream | 397309 | 3714611 ~ 3717569 (+) |
| G159234 | NA | non-coding | upstream | 75186 | 3241496 ~ 3241775 (+) |
| G158766 | NA | non-coding | upstream | 104660 | 3211783 ~ 3212301 (+) |
| G158774 | NA | non-coding | upstream | 109675 | 3206998 ~ 3207286 (+) |
| CI01000030_03172301_03180142 | NA | non-coding | upstream | 138997 | 3172255 ~ 3180536 (+) |
| G159417 | NA | non-coding | downstream | 213495 | 3530797 ~ 3531025 (+) |
| G159418 | NA | non-coding | downstream | 214032 | 3531334 ~ 3531604 (+) |
| G159420 | NA | non-coding | downstream | 215491 | 3532793 ~ 3533268 (+) |
| G159433 | NA | non-coding | downstream | 228091 | 3545393 ~ 3547030 (+) |
| G159434 | NA | non-coding | downstream | 230218 | 3547520 ~ 3547738 (+) |
| CI01000030_03018776_03042194 | FGF22 | other | upstream | 273188 | 3018776 ~ 3043773 (+) |
| G158416 | NA | other | upstream | 702668 | 2595876 ~ 2614293 (+) |
| CI01000030_02277208_02282376 | TM6SF2 | other | upstream | 1034591 | 2277208 ~ 2282743 (+) |
| G157726 | NA | other | upstream | 1678734 | 1636867 ~ 1638227 (+) |
| CI01000030_01003310_01003776 | NA | other | upstream | 2310274 | 1003114 ~ 1003795 (+) |
| G159685 | NA | other | downstream | 1114498 | 4431800 ~ 4488526 (+) |
| G159816 | NA | other | downstream | 1199476 | 4516778 ~ 4517381 (+) |
| CI01000030_07200104_07202258 | GCGA | other | downstream | 3882633 | 7200104 ~ 7202485 (+) |
| CI01000030_07868597_07886123 | NA | other | downstream | 4536783 | 7868292 ~ 7886228 (+) |
| G162088 | NA | other | downstream | 4920663 | 8237965 ~ 8239604 (+) |
