XLOC_008883 (si:ch73-144d13.5)


Basic Information

Item Value
gene id XLOC_008883
gene name si:ch73-144d13.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 586605 ~ 604353 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017548
cgccgcgaTTACATATCTGCTGTGAGTCGGCTGTAGAAACCAATGCAAGCCTTTCGGCTGGTGTAAGTTCACAACAGATGTAACATCGCGTACCCGTTGCTTAATTTAACATACCAATACTTTATTTATCATTTCTAAACGGTGTTTTGTGCGAGTAAAGAGCATCTACGCGAGGAATAGAAGAGCCGCGTCTCATGTTACTATTTATATCGTCAATCAGTTCATCAGAAACACGAATTCAGTCACTGACAAACAGAGACGAGAGAAACGGAGCTTTTACAGAAACTACAGAAATTCCGAGTCAATTGAATCAAATGATTCAATTGACTCGTTTGAATCACCCCTGTCGACTTCTTCTGGCCAAACAGAGAAAAGAGGAGCGACTGATTTATTTactgttataaagatggcgtttattaaagaggagagtgaagacatcaagattgaagaaacattcacagtcaaacatgaagagactgaagaagctttcagagtcaaacatgaagatcctgagcaacaaacagATCTGATGCCACtgaaagaggagagtgaagaagtTAATGAAATGAAAGGGGAACCTCAATATGAAAATCAGAATTTcatagctgaaggaaaatatttTAGTTGCTCGAATAATGAAAAGACTTTATCAATAAAAAGAGCTCAAGACACTGGAAGTCAACAATGTGATAAGACTATCAGcaacaaaataaaccatgaaagaTGTGTTAAATCTCGGAAAGGAAAGAAGTCCTACACATGCTCcctgtgtggaaagagttttaaacaTACAGGACACTTTAAAgatcacatgagaattcacactggagaaaaacctttcacttgccaacagtgtggaaaaagcttcagTCGCAAAATAACCCTTCAAAGACATGTTAAAATTCACAACGAAGAGAAGCCGTACATGTgccatcagtgtggaaagagtttcattCAAAAAGGATaccttaaagtccacatgaaagttcacactggagagaaaccctacACTTGCCCACAGTGTGGAAGGGGTTTCATTCAAAAAGGGAACTACagagtgcacatgagaattcactcAGAAGAAAAACAGCACACTTGCCCTCATTGCGGAAAGAGTTTCAACCAGGCAGGACACCTTCGGGACCACAttagaactcacactggagagaaaccctacACATGCCCTctctgtggaaagagtttcattCAAAAAGGGAACTACagagtgcacatgagaattcactcAGAAGAAAAACAGAATACTTGCCCTCAGTGCGGAAAGAGTTTCAATCAGACAGGACACCTTCGAGACCACATTAgaactcacaccggagagaaaccctaCACTTGCGCTCAGTGTGGAAAGGGTTTCAATCAAAAAAGTCACTATACagtccacatgagaattcactcTGAAGAAAAACCCTACAATTGCGCTCAATGTGGAAAGAGCTTCAATCAAAAGGTACATTATAcagcccacatgagaattcactcTGGAGAAAAGCCCtacacatgccctcagtgtggaaagggctttagCTGTAAATTGACCTATAACAGACATATTGGTAGTCACAATGCAGTAAAGACTTAATGTGGGACACACCGTGCAGTTGGACCGTCGATGAGGGTCTGTAGTGCCAGTGTGTTTGGTGTGTTCTAGATGTTGCAAAACACTCTCGTTTCAGTCTGCTGCCATCTCTTTCATGTGTTCATGTGCAGCTTTTCTGTCCAGGTAGGATCAGAAGAGTAAAAGACTCTTGAATTTTGGGACTTGGTCCAACACCTGAGACACTGATATTTGTTATTTTCTCAGGTCAGCAGGTGTGTTAGATGGCTGCCGATCTCTGTCCAAGATGATTTAAAGACTAGAGGCTTTTCTCCAGATGGCCAACAGTTCACAACTTTTCTCCAAGATTGTTTCTAGTTCAGAGAGTTTGTCCAAAATGTTGAATAACCTAGATCAGGGATGTGTAACTTCAGTCTTGGAGAGCca
>TCONS_00017549
atggcgtttattaaagaggagagtgaagacatcaagattgaagaaacattcacagtcaaacatgaagagactgaagaagctttcagagtcaaacatgaagatcctgagcaacaaacagATCTGATGCCACtgaaagaggagagtgaagaagtTAATGAAATGAAAGGGGAACCTCAATATGAAAATCAGAATTTcatagctgaaggaaaatatttTAGTTGCTCGAATAATGAAAAGACTTTATCAATAAAAAGAGCTCAAGACACTGGAAGTCAACAATGTGATAAGACTATCAGcaacaaaataaaccatgaaagaTGTGTTAAATCTCGGAAAGGAAAGAAGTCCTACACATGCTCcctgtgtggaaagagttttaaacaTACAGGACACTTTAAAgatcacatgagaattcacactggagaaaaacctttcacttgccaacagtgtggaaaaagcttcagTCGCAAAATAACCCTTCAAAGACATGTTAAAATTCACAACGAAGAGAAGCCGTACATGTgccatcagtgtggaaagagtttcattCAAAAAGGATaccttaaagtccacatgaaagttcacactggagagaaaccctacACTTGCCCACAGTGTGGAAGGGGTTTCATTCAAAAAGGGAACTACagagtgcacatgagaattcactcAGAAGAAAAACAGCACACTTGCCCTCATTGCGGAAAGAGTTTCAACCAGGCAGGACACCTTCGGGACCACAttagaactcacactggagagaaaccctacACATGCCCTctctgtggaaagagtttcattCAAAAAGGGAACTACagagtgcacatgagaattcactcAGAAGAAAAACAGAATACTTGCCCTCAGTGCGGAAAGAGTTTCAATCAGACAGGACACCTTCGAGACCACATTAgaactcacaccggagagaaaccctaCACTTGCGCTCAGTGTGGAAAGGGTTTCAATCAAAAAAGTCACTATACagtccacatgagaattcactcTGAAGAAAAACCCTACAATTGCGCTCAATGTGGAAAGAGCTTCAATCAAAAGGTACATTATAcagcccacatgagaattcactcTGGAGAAAAGCCCtacacatgccctcagtgtggaaagggctttagCTGTAAATTGACCTATAACAGACATATTGGTAGTCACAATGCAGTAAAGACTTAA
>TCONS_00017550
CAGGATGTTCACATACAGCGTATCTGTCGAGACTGGAGACCAGGCGTTTGCTGGCACTCTGAACTACATTTACCTGACGCTGGTGGGCGATAAGAGAAGCAGCGTCCGAACTCTGCTGGACAAATCCTGGCTTAAACGTTTGGAAAGAGGAACGGTGATTTCCATTGACGTTCATGTGGAGGAGACTCTTGGAGAGCTTCTGCTGGTCAAACTGGAGAAGGAGAAAACCCTGATCAATGATCAATGGTACTGCAGGAGCATCAGCGTAACAGCACCCACCGGAGACTGCTTCGAGTTCCCCTGTTATCACTGGATAGCGGATCAACAGGAGCTGGCGCTTCCGGAAGGCCGGGGTCGATTGCCTCAGGATGAAAAGCTCTCAATACTGAAACAGTACAGGCACAAGGAACTggaaaacagacaaaaacaattTAGGTGGAATGAATGGAAAGCTGGTTTACCACTGTCCATAGATGCCAATGGCTGCTCTGAACTGCCTCTGGACGTTCAGTTTGATACCGCAAAATCAGTGGACTTCAGTGTGAATTTCCTAGAGGGgaTCAGGATTCTTGGTCTTAACAAACTTAAGAGTGTGTTCCAGTCTTGGAAAGACTTTGCAGATTTTGAAAAAGTGTTCATAACCATCAAGAACACCGTGTCAGAGTATTTGATGGAGAACTGGACTGAAGATGCAGTGTTTGGTTATCAGTTCTTAAATGGCAGCAATCCTGTGATGATCAAAAAGTGCAGGAAACTTCCAGACAAGTTTGTGGTCACGCAGGAGATGGTGGAGGACTCCCTGGATAGAGGAACCACACTGCAGGAGGAATTACAGGCAGGAAACATCTACATAGCAGACTATGAAATACTGGAGGACGTTCAACCCAATGACACAGACTCCAGCACCCGGCAGTATTTGGCCGCCCCCTTCTGCCTGTTTTACAAGAACAGCCAGAACAAAATCATACCAATCGCCATTCAGCTCAGTCGTGAGGCTACTCCAGGACAGAAGAACACAGTCTTTCTGCCCAGCGATAATCACTACGACTGGTTGTTAGCCAAAATGTGGGTGAAATCCTGCGACTTCAACGTAcaccagctcatcacacacctTCTCAGGACACACCTGACATCTGAGGTGTTTGCCATAGCCATGTTCAGACAGCTCTCTGCTGTCCATCCTGTGTACAAGTTACTGATCCCTCATGTCCGTTTCACCATTGCCATCAACACTTCAGCTCGTCAAACACTCATCAACGACACTGGGGTCTTTAATAAGGCTAACAGCACTGGAGGAATTGGAGTTTTGCAAGTGGTCCACAGGGCCATGAAGACATTGACCTATAAGTCCATGTGCTTCCCTGAGGCTATGAAAGCTCGAGATGTTCACGACCAGGAAGATCTGCCCAACTACTACTATAGAGACGATGGCATGCTGGTCTGGGAGGCTGTGAAAAGCTTTGTCTCTGATGTGGTGGAGATCTACTACAGTAGTGATGAGACCGTTCTGGAAGACGAGGAGATCCAGGCGTTTGTTCAGGATGTTCACTCCTCTGGTATGAAGAATTGTCCCAATAGTGGGGAGTTTCCAAACATGCTGAGAACCCGGGAGCAGCTGGTTGAGTATCTGACCGTGATGATTTTCACAGCTTCAGCTCAACATGCAGCAGTCAACTTTGGACAGTTTGACTGGTTTGCTTGGGTCCCGAACACTCCGTCCACCATGCGGAAACCTCCTCCCACAGAGAAAGGCAAAGTGGATATGAAGTACATCATGGAGAGTCTGCCGGACCGCGGACGCTCCGGCTGGCACCTGGGAGCACTTTGGTCGCTCAGTCAGTTCCAGGATAACGAGCTGTTTTTAGGCGAATACCCTGATAAGTACTTCACCGAAGAACCAGCCATTGAAGCTATTAAGAATTTCCGCAAGACATTAGTTGACATCACAAAGATCATCAAGAAGAGAAATGAAACTCTGGAGCTGCCCTACTGGTATCTGTCTCCAGACAGAATCCCCAACAGCGTGGCCATCTGAAGAAAACATCTGTCATACATCCACAAAAGCTGTTCACAGCACATCTGCACAGCACGTCACTTAAAAAAACGCCAGCAAAACACTGGGCTATTATCACTCAATCAAAATAAACGTGCAAGCAACAAATTACTGCCAATATTTACTGTACTTCAGAGATGCATGGGTGGCTAATgagaatttttataattatttataatcagTTTGGCATTCACACAGTTGTTATTTGATTTTAATCAAACATCAcatatttattattgtgtttttgtgttttatataattCTTTATTTTCCATTGTTTGTAAAGTTTCATATTATTTGTAATTGTCATCGGGAGTAAcagccatttctttttttttttttatattactggaCAATGGTTTAAATGATATTTCTTGTATAATAACACTGGGTGGATTTGTACTGAGCATTAAAATACACTGAAGTTCATTCAATAAACTAACTATACTTTCCCATCACTTTGTCCACTGCTTTCTGCTCTTGAAGACGTTTCAAACAGTTTCAGGTACCGGGCAAGACATGTTATTGGCAGGTTTGACTGGTTTATTCTGCATAGGGACATCTGATCTAACATCATTAATCTAAGAACATTACTAATACATTCAACTTCTTTCTTGTTTTCTCTTGACTTTCTAAAAGTTTTTATGAAACCTAAAACACATCTCTCAAACCACAAGTAGAACTATTGTCACACAATTGGAGAATTCCAAAGAAATTTTCCCCTCGCAGTGATTCTTTTCCTTGACTGAAACACATctcttatatttttattacaagaTTCTAGGTGCCATTcactattttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttaataagCTTGAATACAATTTATACAACAACAAATATGCAGaataattatctttaaaaaaagaagaaaaaaacaacagctaaaaacaaaaagaaaagaagaactGCTAAACACAGGAGTTATAAAAAATTGCATATTAAATAGGTAAAAATTACTGATTAAACACAGGGAAAGAGCCGCAGCAGTTGAAGTTTTAGAGCCTTTTTGTTAAAACCCAATTGGATCAATAAAAGGTATTGCTTAAATTCGTTCAGAGAAACCATAAACATAGGTCTGGAGATAAAAAAATTTTTGATTTATAAATGTGAAGCCATTCACTgtgtctgttttttattatttcataacaaGAACAATAGCATGCATGATGAATACAATGCTTACATTTTTTCCACATCAAAAGAACAAATCAGTAGAAAcctaaaaacaaaatcacataaatatatataatatatataaattacaaaaaaaaaaatcgcataaGAAAATGATTCCAAAATCCACTCACTTTTGTTTTGGTTTCCCTTTTGTGAATGAGAGCGAgagtgacgtcataaggctgcgccgcgaTTACATATCTGCTGTGAGTCGGCTGTAGAAACCAATGCAAGCCTTTCGGCTGGTGTAAGTTCACAACAGATGTAACATCGCGTACCCGTTGCTTAATTTAACATACCAATACTTTATTTATCATTTCTAAACGGTGTTTTGTGCGAGTAAAGAGCATCTACGCGAGGAATAGAAGAGCCGCGTCTCATGTTACTATTTATATCGTCAATCAGTTCATCAGAAACACGAATTCAGTCACTGACAAACAGAGACGAGAGAAACGGAGCTTTTACAGAAACTACAGAAATTCCGAGTCAATTGAATCAAATGATTCAATTGACTCGTTTGAATCACCCCTGTCGACTTCTTCTGGCCAAACAGAGAAAAGAGGAGCGACTGATTTATTTGTTAGTCAATGTTGCTTTGGTATTATTGTCTGGTGATTTCACAATAATCTCAGTCTGCCTGCACTAGAGAGTTGTTTGAGATTTGTTTTTCCTCAATGATTGTGTTTATCTGCagactgttataaagatggcgtttattaaagaggagagtgaagacatcaagattgaagaaacattcacagtcaaacatgaagagactgaagaagctttcagagtcaaacatgaagatcctgagcaacaaacag
>TCONS_00017551
TCTCTGAGCACTCGCACTGAACCTCCCGGCGGGATTAAAGCACATCAGAGGCGTCATCAAGAGCTGCAGCAGGATGTTCACATACAGCGTATCTGTCGAGACTGGAGACCAGGCGTTTGCTGGCACTCTGAACTACATTTACCTGACGCTGGTGGGCGATAAGAGAAGCAGCGTCCGAACTCTGCTGGACAAATCCTGGCTTAAACGTTTGGAAAGAGGAACGGTGATTTCCATTGACGTTCATGTGGAGGAGACTCTTGGAGAGCTTCTGCTGGTCAAACTGGAGAAGGAGAAAACCCTGATCAATGATCAATGGTACTGCAGGAGCATCAGCGTAACAGCACCCACCGGAGACTGCTTCGAGTTCCCCTGTTATCACTGGATAGCGGATCAACAGGAGCTGGCGCTTCCGGAAGGCCGGGGTCGATTGCCTCAGGATGAAAAGCTCTCAATACTGAAACAGTACAGGCACAAGGAACTggaaaacagacaaaaacaattTAGGTGGAATGAATGGAAAGCTGGTTTACCACTGTCCATAGATGCCAATGGCTGCTCTGAACTGCCTCTGGACGTTCAGTTTGATACCGCAAAATCAGTGGACTTCAGTGTGAATTTCCTAGAGGGgaTCAGGATTCTTGGTCTTAACAAACTTAAGAGTGTGTTCCAGTCTTGGAAAGACTTTGCAGATTTTGAAAAAGTGTTCATAACCATCAAGAACACCGTGTCAGAGTATTTGATGGAGAACTGGACTGAAGATGCAGTGTTTGGTTATCAGTTCTTAAATGGCAGCAATCCTGTGATGATCAAAAAGTGCAGGAAACTTCCAGACAAGTTTGTGGTCACGCAGGAGATGGTGGAGGACTCCCTGGATAGAGGAACCACACTGCAGGAGGAATTACAGGCAGGAAACATCTACATAGCAGACTATGAAATACTGGAGGACGTTCAACCCAATGACACAGACTCCAGCACCCGGCAGTATTTGGCCGCCCCCTTCTGCCTGTTTTACAAGAACAGCCAGAACAAAATCATACCAATCGCCATTCAGCTCAGTCGTGAGGCTACTCCAGGACAGAAGAACACAGTCTTTCTGCCCAGCGATAATCACTACGACTGGTTGTTAGCCAAAATGTGGGTGAAATCCTGCGACTTCAACGTAcaccagctcatcacacacctTCTCAGGACACACCTGACATCTGAGGTGTTTGCCATAGCCATGTTCAGACAGCTCTCTGCTGTCCATCCTGTGTACAAGTTACTGATCCCTCATGTCCGTTTCACCATTGCCATCAACACTTCAGCTCGTCAAACACTCATCAACGACACTGGGGTCTTTAATAAGGCTAACAGCACTGGAGGAATTGGAGTTTTGCAAGTGGTCCACAGGGCCATGAAGACATTGACCTATAAGTCCATGTGCTTCCCTGAGGCTATGAAAGCTCGAGATGTTCACGACCAGGAAGATCTGCCCAACTACTACTATAGAGACGATGGCATGCTGGTCTGGGAGGCTGTGAAAAGCTTTGTCTCTGATGTGGTGGAGATCTACTACAGTAGTGATGAGACCGTTCTGGAAGACGAGGAGATCCAGGCGTTTGTTCAGGATGTTCACTCCTCTGGTATGAAGAATTGTCCCAATAGTGGGGAGTTTCCAAACATGCTGAGAACCCGGGAGCAGCTGGTTGAGTATCTGACCGTGATGATTTTCACAGCTTCAGCTCAACATGCAGCAGTCAACTTTGGACAGTTTGACTGGTTTGCTTGGGTCCCGAACACTCCGTCCACCATGCGGAAACCTCCTCCCACAGAGAAAGGCAAAGTGGATATGAAGTACATCATGGAGAGTCTGCCGGACCGCGGACGCTCCGGCTGGCACCTGGGAGCACTTTGGTCGCTCAGTCAGTTCCAGGATAACGAGCTGTTTTTAGGCGAATACCCTGATAAGTACTTCACCGAAGAACCAGCCATTGAAGCTATTAAGAATTTCCGCAAGACATTAGTTGACATCACAAAGATCATCAAGAAGAGAAATGAAACTCTGGAGCTGCCCTACTGGTATCTGTCTCCAGACAGAATCCCCAACAGCGTGGCCATCTGAAGAAAACATCTGTCATACATCCACAAAAGCTGTTCACAGCACATCTGCACAGCACGTCACTTAAAAAAACGCCAGCAAAACACTGGGCTATTATCACTCAATCAAAATAAACGTGCAAGCAACAAATTACTGCCAATATTTACTGTACTTCAGAGATGCATGGGTGGCTAATgagaatttttataattatttataatcagTTTGGCATTCACACAGTTGTTATTTGATTTTAATCAAACATCAcatatttattattgtgtttttgtgttttatataattCTTTATTTTCCATTGTTTGTAAAGTTTCATATTATTTGTAATTGTCATCGGGAGTAAcagccatttctttttttttttttatattactggaCAATGGTTTAAATGATATTTCTTGTATAATAACACTGGGTGGATTTGTACTGAGCATTAAAATACACTGAAGTTCATTCAATAAACTAACTATACTTTCCCA
>TCONS_00017552
CCTTCATCTGACGTTCGTCCTGTGATATTCTCTGTTTTGTTCACAAGAACTCATCCGTGTTCTCTTATTTTACAGGCTAACAGCACTGGAGGAATTGGAGTTTTGCAAGTGGTCCACAGGGCCATGAAGACATTGACCTATAAGTCCATGTGCTTCCCTGAGGCTATGAAAGCTCGAGATGTTCACGACCAGGAAGATCTGCCCAACTACTACTATAGAGACGATGGCATGCTGGTCTGGGAGGCTGTGAAAAGCTTTGTCTCTGATGTGGTGGAGATCTACTACAGTAGTGATGAGACCGTTCTGGAAGACGAGGAGATCCAGGCGTTTGTTCAGGATGTTCACTCCTCTGGTATGAAGAATTGTCCCAATAGTGGGGAGTTTCCAAACATGCTGAGAACCCGGGAGCAGCTGGTTGAGTATCTGACCGTGATGATTTTCACAGCTTCAGCTCAACATGCAGCAGTCAACTTTGGACAGTTTGACTGGTTTGCTTGGGTCCCGAACACTCCGTCCACCATGCGGAAACCTCCTCCCACAGAGAAAGGCAAAGTGGATATGAAGTACATCATGGAGAGTCTGCCGGACCGCGGACGCTCCGGCTGGCACCTGGGAGCACTTTGGTCGCTCAGTCAGTTCCAGGATAACGAGCTGTTTTTAGGCGAATACCCTGATAAGTACTTCACCGAAGAACCAGCCATTGAAGCTATTAAGAATTTCCGCAAGACATTAGTTGACATCACAAAGATCATCAAGAAGAGAAATGAAACTCTGGAGCTGCCCTACTGGTATCTGTCTCCAGACAGAATCCCCAACAGCGTGGCCATCTGAAGAAAACATCTGTCATACATCCACAAAAGCTGTTCACAGCACATCTGCACAGCACGTCACTTAAAAAAACGCCAGCAAAACACTGGGCTATTATCACTCAATCAAAATAAACGTGCAAGCAACAAATTACT
>TCONS_00017553
ctgtcatcataaaataaaagaaatcagttattagaaatgattagaAAAGGATTacgtttagaaacgtgttgaacatctctccgttaaacagaaatcgaggAAAACAACTATAGTGATGTGACGTCTAACAGAAGTTGTCGTTAAAGGTGATTTCCATTGACGTTCATGTGGAGGAGACTCTTGGAGAGCTTCTGCTGGTCAAACTGGAGAAGGAGAAAACCCTGATCAATGATCAATGGTACTGCAGGAGCATCAGCGTAACAGCACCCACCGGAGACTGCTTCGAGTTCCCCTGTTATCACTGGATAGCGGATCAACAGGAGCTGGCGCTTCCGGAAGGCCGGGGTCGATTGCCTCAGGATGAAAAGCTCTCAATACTGAAACAGTACAGGCACAAGGAACTggaaaacagacaaaaacaattTAGGTACAAT

Function

symbol description
si:ch73-144d13.5 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131120-187 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.
ZDB-GENE-050522-330 Predicted to enable arachidonate 5-lipoxygenase activity. Predicted to be involved in fatty acid metabolic process and lipid oxidation. Predicted to be located in cytoplasm. Predicted to be active in nuclear envelope. Is expressed in EVL and periderm. Human ortholog(s) of this gene implicated in artery disease (multiple); asthma (multiple); pancreatic cancer; and pulmonary tuberculosis. Orthologous to human ALOX5 (arachidonate 5-lipoxygenase).

Ensembl:

ensembl_id ENSDARG00000069966 ENSDARG00000097812

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017548 False 1999 mRNA 0.41 3 586605 591308
TCONS_00017549 False 1191 mRNA 0.40 2 587007 590787
TCONS_00017550 False 4090 mRNA 0.41 14 590670 601971
TCONS_00017551 False 2576 mRNA 0.45 15 592253 604353
TCONS_00017552 False 962 lncRNA 0.47 5 592594 595263
TCONS_00017553 True 434 lncRNA 0.43 2 600847 601359

Neighbor

gene id symbol gene type direction distance location
XLOC_008882 cbln20 coding downstream 10470 572195 ~ 576135 (-)
XLOC_008881 cbln18 coding downstream 17960 556956 ~ 568645 (-)
XLOC_008880 tagln coding downstream 35424 543744 ~ 551181 (-)
XLOC_008879 nudt8 coding downstream 80595 499848 ~ 506010 (-)
XLOC_008878 mfrp coding downstream 109382 464229 ~ 477223 (-)
XLOC_008884 si:ch73-144d13.7 coding upstream 6876 611229 ~ 617797 (-)
XLOC_008885 NA coding upstream 18356 622709 ~ 633408 (-)
XLOC_008886 si:ch211-210b2.4 coding upstream 43501 647854 ~ 660394 (-)
XLOC_008887 si:ch211-210b2.2 coding upstream 60803 665156 ~ 669476 (-)
XLOC_008888 zgc:171901 coding upstream 68631 672984 ~ 684911 (-)
XLOC_008874 NA non-coding downstream 156958 428419 ~ 429647 (-)
XLOC_008873 CABZ01056628.1 non-coding downstream 160849 425695 ~ 425756 (-)
XLOC_008871 NA non-coding downstream 208418 374380 ~ 378187 (-)
XLOC_008870 FP102887.1 non-coding downstream 237038 349451 ~ 349567 (-)
XLOC_008869 BX640522.2 non-coding downstream 296098 282731 ~ 290507 (-)
XLOC_008893 NA non-coding upstream 208743 813096 ~ 815019 (-)
XLOC_008894 NA non-coding upstream 213838 818191 ~ 848462 (-)
XLOC_008895 NA non-coding upstream 232662 837015 ~ 848792 (-)
XLOC_008896 NA non-coding upstream 265608 869961 ~ 909037 (-)

Expression


Co-expression Network