G159547


Basic Information

Item Value
gene id G159547
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3810733 ~ 3811214 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181119
CTATGACTAACTGAATATTTGCATGTAGATGTCTTTAGGCCAGGACTCTTATCACACATGTGAAGTTTGGGGCAGATCGGACACTGCATGACTGTGTTACAACAACTTCCTGTTTCGTGACGAAACATCAAAATTTGTCAGGCCGCCACGGACACGCCCTTCAGCAAAAACTCTAGATCTTCGCAATTTAACGTCTCAAAGGCCTTTAGATTAGACTGACCAAATATGATGTTAATCTGATTAAAGCTCTAGGAGGAGTTCGTTAAAGTACAACGTCTGGAAATGGCAAAAACTGCAAAAATTTTGCAGATAAAATTCAAAATATCTCACTTCCTGTTGGGTTTACAGATTTTGCACCCAGAGACTTTTTTGTAGGTATTGGGCTGTTACATCCATCTACCGAATTTCATACCTGTACGTGAAACGTAGCACGAAGGGCGCTTAATTGAAATTTTGTAGGTGACGCTATGGAGCCACACCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181119 True 482 lncRNA 0.41 1 3810733 3811214

Neighbor

gene id symbol gene type direction distance location
CI01000030_03765594_03778884 ONECUT3, ONECUT3A coding upstream 31701 3765062 ~ 3779032 (+)
CI01000030_03744173_03745628 FOXQ2 coding upstream 64992 3743491 ~ 3745741 (+)
CI01000030_03715463_03716370 NA coding upstream 93164 3714611 ~ 3717569 (+)
CI01000030_03703231_03704355 NA coding upstream 106118 3701601 ~ 3704615 (+)
CI01000030_03594936_03629403 UNC13A coding upstream 181248 3594936 ~ 3629485 (+)
CI01000030_03825765_03826754 NA coding downstream 14201 3825415 ~ 3826794 (+)
CI01000030_03838027_03838812 NA coding downstream 25114 3836328 ~ 3840945 (+)
CI01000030_03909138_03910046 NA coding downstream 97824 3909038 ~ 3910046 (+)
CI01000030_03915675_03916993 NA coding downstream 104072 3915286 ~ 3916993 (+)
CI01000030_03917423_03918481 NA coding downstream 106209 3917423 ~ 3918674 (+)
G159546 NA non-coding upstream 494 3809938 ~ 3810239 (+)
G159545 NA non-coding upstream 1086 3809424 ~ 3809647 (+)
G159483 NA non-coding upstream 47450 3763048 ~ 3763283 (+)
G159548 NA non-coding downstream 518 3811732 ~ 3811980 (+)
G159552 NA non-coding downstream 5548 3816762 ~ 3816999 (+)
G159553 NA non-coding downstream 8607 3819821 ~ 3820046 (+)
G159556 NA non-coding downstream 13073 3824287 ~ 3824551 (+)
G159561 NA non-coding downstream 32574 3843788 ~ 3843996 (+)
CI01000030_03018776_03042194 FGF22 other upstream 766960 3018776 ~ 3043773 (+)
G158416 NA other upstream 1196440 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1528363 2277208 ~ 2282743 (+)
G157726 NA other upstream 2172506 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2804046 1003114 ~ 1003795 (+)
G159685 NA other downstream 620586 4431800 ~ 4488526 (+)
G159816 NA other downstream 705564 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3388721 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4042871 7868292 ~ 7886228 (+)
G162088 NA other downstream 4426751 8237965 ~ 8239604 (+)

Expression


Co-expression Network