G159561


Basic Information

Item Value
gene id G159561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3843788 ~ 3843996 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181147
CGCCAACTGACCTGGCATGCATAATACAGCATTTTAGTCATTTTCATGGACCCAGATCCCATAGACTGTAAAAGAAGATGGCTGACGCACCTTCACTCTCTTCCATTGTAGTAACTGAAGCCGCCAGTGTGCCAATATGGCGCTGACATCTTGAGTCTTGAGTTTGCGCATAATGAACTTGGAGCCAGAGTCTGCGCGGTAGTGAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181147 True 209 lncRNA 0.48 1 3843788 3843996

Neighbor

gene id symbol gene type direction distance location
CI01000030_03838027_03838812 NA coding upstream 2843 3836328 ~ 3840945 (+)
CI01000030_03825765_03826754 NA coding upstream 16994 3825415 ~ 3826794 (+)
CI01000030_03765594_03778884 ONECUT3, ONECUT3A coding upstream 64756 3765062 ~ 3779032 (+)
CI01000030_03744173_03745628 FOXQ2 coding upstream 98047 3743491 ~ 3745741 (+)
CI01000030_03715463_03716370 NA coding upstream 126219 3714611 ~ 3717569 (+)
CI01000030_03909138_03910046 NA coding downstream 65042 3909038 ~ 3910046 (+)
CI01000030_03915675_03916993 NA coding downstream 71290 3915286 ~ 3916993 (+)
CI01000030_03917423_03918481 NA coding downstream 73427 3917423 ~ 3918674 (+)
CI01000030_03926592_03926762 NA coding downstream 82596 3926592 ~ 3927205 (+)
CI01000030_04070253_04083457 NA coding downstream 225451 4069447 ~ 4083892 (+)
G159556 NA non-coding upstream 19237 3824287 ~ 3824551 (+)
G159553 NA non-coding upstream 23742 3819821 ~ 3820046 (+)
G159552 NA non-coding upstream 26789 3816762 ~ 3816999 (+)
G159548 NA non-coding upstream 31808 3811732 ~ 3811980 (+)
G159547 NA non-coding upstream 32574 3810733 ~ 3811214 (+)
G159484 NA non-coding downstream 7996 3851992 ~ 3919867 (+)
G159490 NA non-coding downstream 62085 3906081 ~ 3908489 (+)
G159593 NA non-coding downstream 90127 3934123 ~ 3934444 (+)
G159604 NA non-coding downstream 130234 3974230 ~ 3974587 (+)
G159631 NA non-coding downstream 182538 4026534 ~ 4028557 (+)
CI01000030_03018776_03042194 FGF22 other upstream 800015 3018776 ~ 3043773 (+)
G158416 NA other upstream 1229495 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1561418 2277208 ~ 2282743 (+)
G157726 NA other upstream 2205561 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2837101 1003114 ~ 1003795 (+)
G159685 NA other downstream 587804 4431800 ~ 4488526 (+)
G159816 NA other downstream 672782 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3355939 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4010089 7868292 ~ 7886228 (+)
G162088 NA other downstream 4393969 8237965 ~ 8239604 (+)

Expression


Co-expression Network