G159631


Basic Information

Item Value
gene id G159631
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4026534 ~ 4028557 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181230
CTGGCAATGCAGGCCTCATTGAGCCATCGGATTTCATCAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACATTATTTTCATTTTTTTTAGGTGAACTAACCCTTTAAGTTCTGTATTTGTATTTTTATATTGTATTACGTGTCCTTATTGTAAAGCACTTTGTAACATTGTTTTGAAAGGTGCTATATAAATAAATTAAATTAAATTTTAATTAATTAATTAATTAATTATTGCTGCCAAAATTACTTGGGGGGGGGGGGGGGGGGGGGGGGCNCAACTGCGTCTGCTTTTGTAGCGTCTTTAGCCGAATTGTTTTTCTTCTTTCCACCACCTGCGTCTTCTAAAGGCGGGAGGTCGTCATCCACATCCTCTTCTACATCTTCCAACATTTCAAAGTCTTCCCCACTATCGAGCAGTGAGGCATGTCCAGATTTCTTACCCGATGGCGCCACCTCCTGGTTATCAGCCGAGCCATTCACAACCTCACCGTCGGCCATCTGGACTCACGTTCGCAATGTGAGGGACAATCTGCTTGGAGCTGCGCAGCAACAACTTTGACAACAAAACAAGATCAATCTGTGCAACTTCCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181230 True 640 lncRNA 0.42 2 4026534 4028557

Neighbor

gene id symbol gene type direction distance location
CI01000030_03926592_03926762 NA coding upstream 99329 3926592 ~ 3927205 (+)
CI01000030_03917423_03918481 NA coding upstream 107860 3917423 ~ 3918674 (+)
CI01000030_03915675_03916993 NA coding upstream 109541 3915286 ~ 3916993 (+)
CI01000030_03909138_03910046 NA coding upstream 116488 3909038 ~ 3910046 (+)
CI01000030_03838027_03838812 NA coding upstream 185589 3836328 ~ 3840945 (+)
CI01000030_04070253_04083457 NA coding downstream 40890 4069447 ~ 4083892 (+)
CI01000030_04163915_04171784 CRLF1B coding downstream 135358 4163915 ~ 4171907 (+)
CI01000030_04183583_04213798 CPAMD8 coding downstream 155026 4183583 ~ 4213798 (+)
CI01000030_04219745_04223677 ODF3L2 coding downstream 191188 4219745 ~ 4224790 (+)
CI01000030_04237332_04243409 SHC2 coding downstream 205131 4233688 ~ 4243787 (+)
G159604 NA non-coding upstream 51947 3974230 ~ 3974587 (+)
G159593 NA non-coding upstream 92090 3934123 ~ 3934444 (+)
G159484 NA non-coding upstream 106667 3851992 ~ 3919867 (+)
G159490 NA non-coding upstream 118045 3906081 ~ 3908489 (+)
G159561 NA non-coding upstream 182538 3843788 ~ 3843996 (+)
G159714 NA non-coding downstream 99826 4128383 ~ 4128777 (+)
G159727 NA non-coding downstream 110426 4138983 ~ 4139239 (+)
G159689 NA non-coding downstream 113827 4142384 ~ 4142789 (+)
G159692 NA non-coding downstream 115664 4144221 ~ 4145049 (+)
G159675 NA non-coding downstream 118482 4147039 ~ 4150826 (+)
CI01000030_03018776_03042194 FGF22 other upstream 982761 3018776 ~ 3043773 (+)
G158416 NA other upstream 1412241 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1744164 2277208 ~ 2282743 (+)
G157726 NA other upstream 2388307 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 3019847 1003114 ~ 1003795 (+)
G159685 NA other downstream 403243 4431800 ~ 4488526 (+)
G159816 NA other downstream 488221 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3171378 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3825528 7868292 ~ 7886228 (+)
G162088 NA other downstream 4209408 8237965 ~ 8239604 (+)

Expression


Co-expression Network