G159740


Basic Information

Item Value
gene id G159740
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4317649 ~ 4317992 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181355
AAGCAACGGTCCTAGTACTGATCTTTGTGGTACTCCATACTGAACTTGTGATCGGTATATGACATCTCATTGTTTACTGCTACAAACTGATAATGGTCAAGTCAAGTCAAGTCAAGTCACCTTTATTTATATAGCGCTTTTTACAATGTAGATTGTGTCAAAGCAGCTTTACATTGATAACTGGTACATTGTTTGGCTGCACAGCATCTCTTAAAGAATAGTGTCAATGCAGGCAGATCAAAAGCACTGTTGAATATCAAATGTCAAGTCAAGTGTCCCCAACTAAGCAAGCCAGAGGCGACAGCGGCAAGGAACCCAAACTCCATCAGGTGACATCAGGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181355 True 344 lncRNA 0.42 1 4317649 4317992

Neighbor

gene id symbol gene type direction distance location
CI01000030_04271795_04300240 SHDB, SHD coding upstream 16605 4271795 ~ 4301044 (+)
CI01000030_04237332_04243409 SHC2 coding upstream 73862 4233688 ~ 4243787 (+)
CI01000030_04219745_04223677 ODF3L2 coding upstream 92859 4219745 ~ 4224790 (+)
CI01000030_04183583_04213798 CPAMD8 coding upstream 103851 4183583 ~ 4213798 (+)
CI01000030_04163915_04171784 CRLF1B coding upstream 145742 4163915 ~ 4171907 (+)
CI01000030_04332510_04342834 MIER2 coding downstream 14518 4332510 ~ 4343650 (+)
CI01000030_04362878_04366419 PLPP2, PLPP2B coding downstream 44886 4362878 ~ 4367296 (+)
CI01000030_04393891_04405162 NA coding downstream 73958 4391950 ~ 4405618 (+)
CI01000030_04454078_04461414 NA coding downstream 133944 4451936 ~ 4462114 (+)
CI01000030_04552559_04571086 NA coding downstream 231954 4549946 ~ 4573001 (+)
G159673 NA non-coding upstream 136263 4172428 ~ 4181386 (+)
G159675 NA non-coding upstream 166823 4147039 ~ 4150826 (+)
G159692 NA non-coding upstream 172600 4144221 ~ 4145049 (+)
G159689 NA non-coding upstream 174860 4142384 ~ 4142789 (+)
G159727 NA non-coding upstream 178410 4138983 ~ 4139239 (+)
G159741 NA non-coding downstream 385 4318377 ~ 4318773 (+)
G159742 NA non-coding downstream 1178 4319170 ~ 4319574 (+)
G159744 NA non-coding downstream 5898 4323890 ~ 4324101 (+)
G159748 NA non-coding downstream 11285 4329277 ~ 4329532 (+)
G159816 NA non-coding downstream 198829 4516778 ~ 4517381 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1273876 3018776 ~ 3043773 (+)
G158416 NA other upstream 1703356 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2035279 2277208 ~ 2282743 (+)
G157726 NA other upstream 2679422 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 3310962 1003114 ~ 1003795 (+)
G159685 NA other downstream 113808 4431800 ~ 4488526 (+)
CI01000030_07200104_07202258 GCGA other downstream 2881943 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3536093 7868292 ~ 7886228 (+)
G162088 NA other downstream 3919973 8237965 ~ 8239604 (+)

Expression


Co-expression Network