G159742


Basic Information

Item Value
gene id G159742
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4319170 ~ 4319574 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181357
AGTTCGACCCAGACAAGGCACAACAAAGTGAAAAAATACGGTAAGCACGGATGACAAGTTAACAGGCTAGTAAAATGCTAAAATGTTGTGCTAGTGATAGCAATTTAGATTAAAAGCTAGCGATGTCAGATTAATGTGATAGGCAATATTAGACAATATCAGATATATGGTGATGAGCAAGTTATATTTAGCAAAATAAACAACAAGGAATGATAGTAAATAGAGATTCAAAACAAAGCTAAATGGAGTTACAGATGCAAACCACTCAGCAGCAAGGCATATCAGTTCCAAGTTCCATGATTTCATTAATAGTAATTTTGAAGTTTTGCCATGTGAAACGTTAAGCATTAAGAAAAATGTTTTCAATAAAAATTGAAGTTTGAAGTTTTACAATGTGAAACGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181357 True 405 lncRNA 0.32 1 4319170 4319574

Neighbor

gene id symbol gene type direction distance location
CI01000030_04271795_04300240 SHDB, SHD coding upstream 18126 4271795 ~ 4301044 (+)
CI01000030_04237332_04243409 SHC2 coding upstream 75383 4233688 ~ 4243787 (+)
CI01000030_04219745_04223677 ODF3L2 coding upstream 94380 4219745 ~ 4224790 (+)
CI01000030_04183583_04213798 CPAMD8 coding upstream 105372 4183583 ~ 4213798 (+)
CI01000030_04163915_04171784 CRLF1B coding upstream 147263 4163915 ~ 4171907 (+)
CI01000030_04332510_04342834 MIER2 coding downstream 12936 4332510 ~ 4343650 (+)
CI01000030_04362878_04366419 PLPP2, PLPP2B coding downstream 43304 4362878 ~ 4367296 (+)
CI01000030_04393891_04405162 NA coding downstream 72376 4391950 ~ 4405618 (+)
CI01000030_04454078_04461414 NA coding downstream 132362 4451936 ~ 4462114 (+)
CI01000030_04552559_04571086 NA coding downstream 230372 4549946 ~ 4573001 (+)
G159741 NA non-coding upstream 397 4318377 ~ 4318773 (+)
G159740 NA non-coding upstream 1178 4317649 ~ 4317992 (+)
G159673 NA non-coding upstream 137784 4172428 ~ 4181386 (+)
G159675 NA non-coding upstream 168344 4147039 ~ 4150826 (+)
G159692 NA non-coding upstream 174121 4144221 ~ 4145049 (+)
G159744 NA non-coding downstream 4316 4323890 ~ 4324101 (+)
G159748 NA non-coding downstream 9703 4329277 ~ 4329532 (+)
G159816 NA non-coding downstream 197247 4516778 ~ 4517381 (+)
G159858 NA non-coding downstream 297769 4617343 ~ 4617551 (+)
G159863 NA non-coding downstream 313614 4633188 ~ 4633460 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1275397 3018776 ~ 3043773 (+)
G158416 NA other upstream 1704877 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2036800 2277208 ~ 2282743 (+)
G157726 NA other upstream 2680943 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 3312483 1003114 ~ 1003795 (+)
G159685 NA other downstream 112226 4431800 ~ 4488526 (+)
CI01000030_07200104_07202258 GCGA other downstream 2880361 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3534511 7868292 ~ 7886228 (+)
G162088 NA other downstream 3918391 8237965 ~ 8239604 (+)

Expression


Co-expression Network