G159887


Basic Information

Item Value
gene id G159887
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4745030 ~ 4745324 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181509
TTAAGATTAGAATGACAACATATGATGTTGATCTGGTTTAATTTCTATGAGGAGTTAATCACAGAGTAAAACATGTCATTTCCTGTTGCCCGCAGGTGGTGCTATGACTGTAACTGATTATTGCCATGTAGATGTCTTCAGGCCAGGACTCTAATAAAACATGTGAAGTTTGGGGAAGATCAGACATTGTATGTACGAGTTACATCAACTCCCTGTTTTATGGCGAAACATCGAACTTTGTCAGGCCGCCACGGACACACCCTTCAGTGAAAACCCAAGATCTTCACAATTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181509 True 295 lncRNA 0.40 1 4745030 4745324

Neighbor

gene id symbol gene type direction distance location
CI01000030_04730959_04734987 NA coding upstream 10043 4729701 ~ 4734987 (+)
CI01000030_04708812_04716224 NA coding upstream 27327 4708577 ~ 4717703 (+)
CI01000030_04588910_04589122 NA coding upstream 155853 4587884 ~ 4589177 (+)
CI01000030_04575377_04586894 GNA15.1 coding upstream 158103 4575074 ~ 4586927 (+)
CI01000030_04552559_04571086 NA coding upstream 172029 4549946 ~ 4573001 (+)
CI01000030_04794796_04802874 DDX59 coding downstream 49318 4794642 ~ 4802932 (+)
CI01000030_04804199_04820916 KIF14 coding downstream 58875 4804199 ~ 4821266 (+)
CI01000030_04822608_04834394 NA coding downstream 77284 4822608 ~ 4834400 (+)
CI01000030_04956344_04956706 NA coding downstream 210982 4956306 ~ 4957238 (+)
CI01000030_04965586_04966361 NA coding downstream 219481 4964805 ~ 4966394 (+)
G159836 NA non-coding upstream 6092 4737802 ~ 4738938 (+)
G159841 NA non-coding upstream 64118 4678164 ~ 4680912 (+)
G159863 NA non-coding upstream 111570 4633188 ~ 4633460 (+)
G159858 NA non-coding upstream 127479 4617343 ~ 4617551 (+)
G159816 NA non-coding upstream 227649 4516778 ~ 4517381 (+)
G159888 NA non-coding downstream 1327 4746651 ~ 4746935 (+)
G159889 NA non-coding downstream 5317 4750641 ~ 4751246 (+)
G159892 NA non-coding downstream 25261 4770585 ~ 4784656 (+)
G159902 NA non-coding downstream 43581 4788905 ~ 4789290 (+)
G159917 NA non-coding downstream 112893 4858217 ~ 4858449 (+)
G159685 NA other upstream 256504 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1701257 3018776 ~ 3043773 (+)
G158416 NA other upstream 2130737 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2462660 2277208 ~ 2282743 (+)
CI01000030_07200104_07202258 GCGA other downstream 2454611 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3108761 7868292 ~ 7886228 (+)
G162088 NA other downstream 3492641 8237965 ~ 8239604 (+)
G161986 NA other downstream 3799258 8544582 ~ 8548325 (+)
G162137 NA other downstream 3822686 8568010 ~ 8571726 (+)

Expression


Co-expression Network