G161977


Basic Information

Item Value
gene id G161977
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8032350 ~ 8111022 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU183904
ATTGTTTTATTTTATTTTATTTTTGACAATATTTTTTGGCAAACCATTGAGTTTTTTTTTTTTACAACCCGAAACTTTTACTCTGCAATGCACATTTTATGTTATTTTATTTATTTTACACTCAGGTTTTTATTTTTTTATTTTATTTTATTTTATTTTATTTTAGAGTTATTTTAGAGTTATTTTAGACAACATATTTGGCAGTTTTTTTACAACCCAAAACTTTTACTCTGCAATGCACATTTTATGTTATTTTATTTTATTTATTTATTTTTTATTTTATTTTTATTTATTTATTTTTTTGACAAATATTTGACAGTTTTTTTTTTTGTTTGTTTTTTTTACTCTGCTATGCACATTTTATGTTATTTTATTTAATTTATGGTCAGGTTTTTATTTTATTTTATTGATAACATTTTTGGCAAATATTTGACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTTCATTGTCTTTACTTCAAAGTTCACAACTAAAAGCACAAGACCATTCTTTTAAAATTTTGTCAATACAAGTTTTTTTATAGAACAGGGAAAACATTTTTTTAACAGTTTGAGGATGTTCACCTCCAGTGCTAACAACGGTTCTGGCAACTGTACAGAGGCAAACATCAGTGGCAAATTTGTTCATTATCAAACACATTGATTCCTCTACTGTTCTCGGACATACATAAGTCTCTTTGTAAACTTTTGAACATTTCTTCTTCTCAAGACCACTGCTAAATATTCAGTGGTAAAGTGCTGTAGCGAAAATGGAAACATTATTAAATTCTTCCCCCAAGATAATAACAAAGCTAAGAATATGTATTACAATATTTAGCTGTAATGTTTTCAGTGTCTGTATGTATCTATGTACAAATGGGTTTACTGTTACAAGAGCAAAAGATGAACTATTGCGCAGTATTGTACATCGTTCTAGATAACAAATGAATCTGGTTTTCAAGAATGAACATGAATTATAGAAGTTACTTTCTCTCAATATATGTGTGCAAAACAAGACATCACTTCCATTTACCACCAGGCTGCAACAACCAATAGGATTAGATGGCGTAAGTGACATCACAATGGCCATTATATAATCATGTCAGTGGTAAATCAAAGCCATTGTTTTTCTGGTACAGCGACTGTGTCATTAAGGGGCATAAATGTATAACGCATCGTTTAAATGTCGCTATTCGTGCAACATGTTGATTGTGATCTTGCAGAACAGGAATACGAATATTACTTTCTTCTGAAAGAAAATAAGAACAATGTAGCTCAATATTTCCGCAGGAAAAAAACGTAGAGAACAAATAACGCTCTCAGCTTTTGTAGGCACAATGGTAAATGTGGCAAATGCTTAAAAAACATCATCCCAAACCCTCCAAAATGAATCATAACCAAAGTTGAATTAAAATGTCAGAATCAAACATCACTCGTTTTATGAACCAATAATAAAATCCAGTTACATTTCCATTCAAAGTAAATGTGCTGCCCGCGTTCTCCACCAACTTGTGTCCTTGCCTTCAGAATTCAGTACTTTAAAATGTAGATGGTAAACTTTTTCGCTCAAATGAGCGCGCATGTACATTTTAGATATGACATCTGGTCCAAACAGAATTGTTTAGGCTACATTGAGCAGCTTAAAAAAATTCAGGGCTCCACTGGAATTAAATGTGAATAAAACAAACATCGAAGAAGTCCAGATACAAACAGTCACTCTTCACTGCTAGACGCAAGTTGCTAAAAGACTTTGAGTGGACAAATTGCACTAAAACAAAGATGAGCATTTTTTTTTTTTTTTTTTCACAAACGTGGGATGCTGCGATCAACAGTATCTGATTTTTTCAGTTTGCCTTTGTTGAAGGACTGGATGGAGCTGAGGAGGGCGCCCCGGCCCACGCCGTTGACACTGGGAGGTGAGAGGGACGGAGGGACGGGTTCACTCCCAGGAGGAGGAGGGGGAGGAGGAGGAGGAGCAGCAGCGGGGGGAGGAAGAGGAGGTGCTGGAGGTGCTCCTGCGGGAATCAGAAAACAGTCCATCAATATCGGTCACGTTTTAGTAATATACCTACTCAGAATCCTTTGCGGTATGTAAACAGGAAGTTATAAAATACAACAGCTATTCAGAATGATACACTTACCACAAAAGGCAACATTTAAAGTCAACATGAAAGTAATTAGCAACTGATATTGATTTTTTTGATGGCCAATGTCTTAGAAAGCGGAGTGGCCAATGGCCAATATAAACCATATATATCATATTTTTTTCAAATAAAAACAAGTTAACACTAATTTTACATACAGCACACAGTGAAAATGACATTAATATGACAGTTGACAAAAGAATATAGCGCAGCATTGTTTGAAATCAAGGGTTTAAAGTTTGTTGTTTGCGCGTCTCTCCTGTCTGCATTCAATTCGCACAGAGTAACCTGTTTTTATGCAGTCTACAAATACACACTTCGGAAGATCTCACATCTGAATGTGACAAAGTCTGCAAGGTTTGTGAAATTAAATGTTAGTGTTATTAGATATTCAAAGACTTAAATTATATAAATGCGTATTTGCTGAATGCTGACGATAGATAGTGTTTGCCTTTCTATTACTAATAATATAAAAGCAAAAGCTAGAATATGTTTTCATATACCGTTTACTTTCTTTGTTTACCAGATTTATCTACTAACATATTATATAGGACTGTTAAACAGAGATGGAAAAACTAATACGGAGAATGGGAGCATTGTGTGCTAAGGTACTGGCATTCTCAGCGCTGTCAAAATAAAAGTCCTGCTCCTGACACACCGACCGATGCCGATAATTACAAAAAAATCCAGATATCGGCCGATATATCAGTCTTGGTGCTATATCGATTGACCACTATGAAAAAATACTATGAAATAAAATAGCATTATTTATTACATAATTCAAATTTATTTAAATTTATATTTAATAAGCAAAGTTATTTAATAAGATTCAATAAATAATATATTATGATATAAAATGTACTAATAGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183904 True 3037 lncRNA 0.33 3 8032350 8111022

Neighbor

gene id symbol gene type direction distance location
CI01000030_07990330_08009606 NISCH coding upstream 22195 7990330 ~ 8010155 (+)
CI01000030_07968740_07975571 NOL8 coding upstream 56629 7968676 ~ 7975721 (+)
CI01000030_07967106_07968408 NOL8 coding upstream 63766 7967106 ~ 7968584 (+)
CI01000030_07954583_07955459 NA coding upstream 75876 7954583 ~ 7956474 (+)
CI01000030_07924704_07945878 ECM2, OMD coding upstream 86411 7924704 ~ 7945939 (+)
CI01000030_08133065_08140755 RBCK1 coding downstream 22043 8133065 ~ 8140998 (+)
CI01000030_08150901_08154024 GM7936 coding downstream 39879 8150901 ~ 8154024 (+)
CI01000030_08155452_08158318 RDH5 coding downstream 44430 8155452 ~ 8158709 (+)
CI01000030_08159242_08166884 GLS2B coding downstream 48220 8159242 ~ 8166945 (+)
CI01000030_08168074_08174577 NA coding downstream 56905 8167927 ~ 8174662 (+)
G162015 NA non-coding upstream 43175 7988580 ~ 7989175 (+)
G161974 NA non-coding upstream 44201 7986556 ~ 7988149 (+)
G161954 NA non-coding upstream 159162 7859914 ~ 7873188 (+)
G161956 NA non-coding upstream 170662 7861182 ~ 7861688 (+)
G161953 NA non-coding upstream 174087 7855627 ~ 7858263 (+)
G162074 NA non-coding downstream 76358 8187380 ~ 8187595 (+)
G162080 NA non-coding downstream 86722 8197744 ~ 8198028 (+)
G162087 NA non-coding downstream 126316 8237338 ~ 8237683 (+)
CI01000030_07868597_07886123 NA other upstream 159578 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 829865 7200104 ~ 7202485 (+)
G159816 NA other upstream 3515243 4516778 ~ 4517381 (+)
G159685 NA other upstream 3543824 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 4988577 3018776 ~ 3043773 (+)
G162088 NA other downstream 126943 8237965 ~ 8239604 (+)
G161986 NA other downstream 433560 8544582 ~ 8548325 (+)
G162137 NA other downstream 456988 8568010 ~ 8571726 (+)
G162449 NA other downstream 1245381 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1931771 10039358 ~ 10047210 (+)

Expression


Co-expression Network