G162150


Basic Information

Item Value
gene id G162150
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8605731 ~ 8605956 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184130
GTAGGTTTGTTTAGCTGATTAATCAGTTATTCTAGAAATCCCCTGAACATTGTAAATCCCTAAAGTGAATTATATTTTATTCCTTGTACAAATTAATTAAAAGTTATTTGCAAATCTAAAACTGACAACTGAATATGGAGGCAAACAAAAAGCCCAGGGAACTTTTATATGGTAGACAACAACTTACCTGAGAATCTCCAGTTTACAGTCACTTTCAAGGTTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184130 True 226 lncRNA 0.32 1 8605731 8605956

Neighbor

gene id symbol gene type direction distance location
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 46334 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 431069 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 438786 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 447022 8155452 ~ 8158709 (+)
CI01000030_08150901_08154024 GM7936 coding upstream 451707 8150901 ~ 8154024 (+)
CI01000030_08763819_08775586 NA coding downstream 157774 8763730 ~ 8775772 (+)
CI01000030_08837486_08838040 NA coding downstream 231265 8837221 ~ 8838451 (+)
CI01000030_08845484_08861801 NA coding downstream 239528 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 256308 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 269309 8875265 ~ 8877569 (+)
G162145 NA non-coding upstream 5920 8597134 ~ 8599811 (+)
G162143 NA non-coding upstream 8961 8596341 ~ 8596770 (+)
G162142 NA non-coding upstream 9481 8594818 ~ 8596250 (+)
G162138 NA non-coding upstream 40811 8563117 ~ 8564920 (+)
G162152 NA non-coding downstream 2397 8608353 ~ 8608606 (+)
G162157 NA non-coding downstream 3324 8609280 ~ 8610505 (+)
G162159 NA non-coding downstream 7234 8613190 ~ 8613546 (+)
G162160 NA non-coding downstream 9193 8615149 ~ 8615481 (+)
G162163 NA non-coding downstream 12436 8618392 ~ 8618653 (+)
G162137 NA other upstream 34005 8568010 ~ 8571726 (+)
G161986 NA other upstream 57406 8544582 ~ 8548325 (+)
G162088 NA other upstream 366127 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 732959 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1403246 7200104 ~ 7202485 (+)
G162449 NA other downstream 750447 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1436837 10039358 ~ 10047210 (+)
G162297 NA other downstream 1527343 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1885490 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 2132625 10738087 ~ 10751548 (+)

Expression


Co-expression Network