G162166


Basic Information

Item Value
gene id G162166
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8631023 ~ 8631380 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184146
CCAAATTCTAAAGCTGAACTGGTGCATTAAATTAATGATTCATGGTTCGTTCAGGTCAGGTCTTATGAAATGCATATTTTGCTAGAAATCATGCTCATCATTTCATTCTCTCTTAAAACTCTTTCCTTCTCACTTACTTTCTTTCTGCAACGTGTAAGAACGTGTGTGTTTGTGTTAGATATTAATTTGTGTTAAAATAATCAATAAAGTCTCCTGGAGTTTTTTTTTTTTTTTAAAGAAGTGTATTGTGTTATGTGTTTAAATTTGTCTTAAACTGCCGATCTTAATGTTACCTTGCTACTAAATAGTGTTTTCACGATAGTTGGCTATTCATATCCGCTACAAGAGCTTATTACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184146 True 358 lncRNA 0.32 1 8631023 8631380

Neighbor

gene id symbol gene type direction distance location
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 71626 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 456361 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 464078 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 472314 8155452 ~ 8158709 (+)
CI01000030_08150901_08154024 GM7936 coding upstream 476999 8150901 ~ 8154024 (+)
CI01000030_08763819_08775586 NA coding downstream 132350 8763730 ~ 8775772 (+)
CI01000030_08837486_08838040 NA coding downstream 205841 8837221 ~ 8838451 (+)
CI01000030_08845484_08861801 NA coding downstream 214104 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 230884 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 243885 8875265 ~ 8877569 (+)
G162165 NA non-coding upstream 89 8630732 ~ 8630934 (+)
G162163 NA non-coding upstream 12370 8618392 ~ 8618653 (+)
G162160 NA non-coding upstream 15542 8615149 ~ 8615481 (+)
G162159 NA non-coding upstream 17477 8613190 ~ 8613546 (+)
G162157 NA non-coding upstream 20518 8609280 ~ 8610505 (+)
G162170 NA non-coding downstream 18267 8649647 ~ 8652824 (+)
G162185 NA non-coding downstream 64393 8695773 ~ 8696057 (+)
G162007 NA non-coding downstream 77623 8709003 ~ 8711359 (+)
G162194 NA non-coding downstream 97304 8728684 ~ 8729518 (+)
G162197 NA non-coding downstream 98685 8730065 ~ 8730362 (+)
G162137 NA other upstream 59297 8568010 ~ 8571726 (+)
G161986 NA other upstream 82698 8544582 ~ 8548325 (+)
G162088 NA other upstream 391419 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 758251 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1428538 7200104 ~ 7202485 (+)
G162449 NA other downstream 725023 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1411413 10039358 ~ 10047210 (+)
G162297 NA other downstream 1501919 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1860066 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 2107201 10738087 ~ 10751548 (+)

Expression


Co-expression Network