G162223


Basic Information

Item Value
gene id G162223
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8786128 ~ 8786927 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184225
CTGATAACAGTGTTATTTCTCAGTCTGTGACGAACAAAACAATAATAAATCAAAATGCAAATGATACCCATCCTTACAGTAGTGTTTACTTTTTCCTTTCTGTGTCGAAAACCATTTTATTAAATGCTACAATTACCATACAGCCGCATAATATGTCCATATGAAATATAGTTCAATTTTCTAATAACGATCAATAAAGTAATTAAATCATTAACTTCTTTCTCTTTTGTATGTGACATTTTCGATCAAAGAAGAATCAGCTAGCAATAAAAAATAAGCAATCAAAAGTTAATGATAAAATAAGAAATTAATTTAAAAGATTAGTTCGCTTCAGTCCTGATAATTTACTCGCCACCATGTCACCCAAGATGAGTGTCTTCCTTTCTTCAGTCGAAAAGAAATTAAGGAAAACATTCCAGGATTTTTCTCCATATAGTGAACTTCAGTGGTGTTCAACGGGTTGAAGGTCCAAATTGCAGTTTCAGTGCAGCTTCAAAGCGCTCTAAACGATCCCAGACGAGGAATAAGAGTCTTGTCTAGTGAAGCGATCAGTCGTTTTTTAACCACAAATGCTCGTCTTGCACTGCTCTGCGATGCGCCACACATTACATAATCACGTTGGAAAGGTCACGCATGACATAGGCGGAAGTACCAAACCCAGTGTTTCAAAAGATTTAAACATCCAGGATACGCACGCAAAAGGACCAATTTAAACAATAAACTAACACAAAGATATGTGTCATTCAACACACAACAACTTTTGAAAGGTCCTCCTTCTCCACACTTGTAAACAGGGTCGG
>TU184226
TAGTGAAGCGATCAGTCGTTTTTTAACCACAAATGCTCGTCTTGCACTGCTCTGCGATGCGCCACACATTACATAATCACGTTGGAAAGGTCACGCATGACATAGGCGGAAGTACCAAACCCAGTGTTTCAAAAGATTTAAACATCCAGGATACGCACGCAAAAGGACCAATTTAAACAATAAACTAACACAAAGATATGTGTCATTCAACACACAACAACTTTTGAAAGGTCCTCCTTCTCCACACTTGTAAACAGGGTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184225 False 800 lncRNA 0.36 1 8786128 8786927
TU184226 True 263 lncRNA 0.42 1 8786665 8786927

Neighbor

gene id symbol gene type direction distance location
CI01000030_08763819_08775586 NA coding upstream 10356 8763730 ~ 8775772 (+)
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 226731 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 611466 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 619183 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 627419 8155452 ~ 8158709 (+)
CI01000030_08837486_08838040 NA coding downstream 50294 8837221 ~ 8838451 (+)
CI01000030_08845484_08861801 NA coding downstream 58557 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 75337 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 88338 8875265 ~ 8877569 (+)
CI01000030_08889890_08899808 NA coding downstream 102963 8889890 ~ 8900680 (+)
G162208 NA non-coding upstream 42339 8743458 ~ 8743789 (+)
G162189 NA non-coding upstream 44814 8733587 ~ 8741314 (+)
G162199 NA non-coding upstream 53133 8732691 ~ 8732995 (+)
G162197 NA non-coding upstream 55766 8730065 ~ 8730362 (+)
G162194 NA non-coding upstream 56610 8728684 ~ 8729518 (+)
G162230 NA non-coding downstream 13349 8800276 ~ 8800565 (+)
G162192 NA non-coding downstream 14320 8801247 ~ 8803792 (+)
G162232 NA non-coding downstream 18567 8805494 ~ 8805958 (+)
G162233 NA non-coding downstream 19741 8806668 ~ 8807177 (+)
G162236 NA non-coding downstream 22397 8809324 ~ 8811455 (+)
G162137 NA other upstream 214402 8568010 ~ 8571726 (+)
G161986 NA other upstream 237803 8544582 ~ 8548325 (+)
G162088 NA other upstream 546524 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 913356 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1583643 7200104 ~ 7202485 (+)
G162449 NA other downstream 569476 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1255866 10039358 ~ 10047210 (+)
G162297 NA other downstream 1346372 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1704519 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1951654 10738087 ~ 10751548 (+)

Expression


Co-expression Network