G162233


Basic Information

Item Value
gene id G162233
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8806668 ~ 8807177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184240
ATAGACTTTAACATTAAAACTCATGTAGCTGGTCTCTTTGCTGACAATTGTTAGTTTATAGAGTCCAGAGTCGGTGGTTTTGGTGTTTGTGATGGTCAGAGATCCGGTTTGATCCAGCTTCAGTCTGTCTCTGAATCTCTCATCATATGTAGAGCTGGTTTGCATGAGCCTGCTGACTTCAGCTATTCGAGTGCTTCCGAACATCCACTGTATCAACAAATATTTCTGTACTTCAGTAAGATCAGTGTTTAGAGTGACAGAATCTCCCTCCATCACTGACACTGACTTCACTTCATTTGTCACATCTAGAAAACAAACAGACACATGTTTTGTCAAAGACTAAGGTCATTATGTCGATCATTAATGACCAAATTACAATTGTATTATGCAGACGTTTTCCTCTAGCATGGATGTTGAATGATTTTCAGTGAACCAAGACTTTAAAATGGGATCTTATAAGAGATGAATAATAATGTGTTTAGGAGTCAAGTATCAGGTGAGGTTTCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184240 True 510 lncRNA 0.38 1 8806668 8807177

Neighbor

gene id symbol gene type direction distance location
CI01000030_08763819_08775586 NA coding upstream 30896 8763730 ~ 8775772 (+)
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 247271 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 632006 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 639723 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 647959 8155452 ~ 8158709 (+)
CI01000030_08837486_08838040 NA coding downstream 30044 8837221 ~ 8838451 (+)
CI01000030_08845484_08861801 NA coding downstream 38307 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 55087 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 68088 8875265 ~ 8877569 (+)
CI01000030_08889890_08899808 NA coding downstream 82713 8889890 ~ 8900680 (+)
G162232 NA non-coding upstream 710 8805494 ~ 8805958 (+)
G162192 NA non-coding upstream 2876 8801247 ~ 8803792 (+)
G162230 NA non-coding upstream 6103 8800276 ~ 8800565 (+)
G162223 NA non-coding upstream 19741 8786128 ~ 8786927 (+)
G162208 NA non-coding upstream 62879 8743458 ~ 8743789 (+)
G162236 NA non-coding downstream 2147 8809324 ~ 8811455 (+)
G162186 NA non-coding downstream 57998 8865175 ~ 8930522 (+)
G162254 NA non-coding downstream 138945 8946122 ~ 8946337 (+)
G162255 NA non-coding downstream 139381 8946558 ~ 8947698 (+)
G162256 NA non-coding downstream 140681 8947858 ~ 8948340 (+)
G162137 NA other upstream 234942 8568010 ~ 8571726 (+)
G161986 NA other upstream 258343 8544582 ~ 8548325 (+)
G162088 NA other upstream 567064 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 933896 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1604183 7200104 ~ 7202485 (+)
G162449 NA other downstream 549226 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1235616 10039358 ~ 10047210 (+)
G162297 NA other downstream 1326122 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1684269 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1931404 10738087 ~ 10751548 (+)

Expression


Co-expression Network