G162432


Basic Information

Item Value
gene id G162432
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9235564 ~ 9236563 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184468
GAGTGGGCAGAGGAGCATAGACAGAAACACTAAATGTTTTTGATGATCGTTTCGCTCCACTTATCAGTAGTTTATAAACTCCAGCATGTTCAGTTGTGATGTTTGTGATGGTCAGAGATCCAGTTTGATTGTCCAGCTTCAGTCTGTCTCTGAATCTCTCATCAGGACTGTTAGACGTAGAGAAGATTCCCGCAGCTCTACTGATTTCAGCTATCAGAGAGTTTTCAGCTCCATATTTCCACAGTATGTCTTCATCTTCACGTATTTCAGTAAGATCAGTGTATAAAGTGACAGAATCTCCCTCCATCACTGACACTGAATCACCAAACACACCTGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184468 True 340 lncRNA 0.42 2 9235564 9236563

Neighbor

gene id symbol gene type direction distance location
CI01000030_09214411_09224921 NA coding upstream 10623 9214280 ~ 9224941 (+)
CI01000030_09181881_09195357 NA coding upstream 39531 9181881 ~ 9196033 (+)
CI01000030_09169745_09175576 GPD1A, GPD1, GPD1B coding upstream 59333 9169649 ~ 9176231 (+)
CI01000030_09158208_09166948 SMARCD1.L, SMARCD1 coding upstream 67391 9158208 ~ 9168173 (+)
CI01000030_09086896_09146359 ASIC1, ASIC1B coding upstream 89205 9086896 ~ 9146359 (+)
CI01000030_09241979_09249271 NA coding downstream 5074 9241637 ~ 9249285 (+)
CI01000030_09259092_09261043 NA coding downstream 21653 9258216 ~ 9261043 (+)
CI01000030_09300172_09306760 NA coding downstream 63242 9299805 ~ 9307374 (+)
CI01000030_09308467_09315467 NA coding downstream 71249 9307812 ~ 9316060 (+)
CI01000030_09321409_09339033 NA coding downstream 84777 9321340 ~ 9339964 (+)
G162190 NA non-coding upstream 85180 9149706 ~ 9150384 (+)
G162202 NA non-coding upstream 195976 9031877 ~ 9039588 (+)
G162257 NA non-coding upstream 285871 8949464 ~ 8949693 (+)
G162256 NA non-coding upstream 287224 8947858 ~ 8948340 (+)
G162255 NA non-coding upstream 287866 8946558 ~ 8947698 (+)
G162438 NA non-coding downstream 44965 9281528 ~ 9281835 (+)
G162439 NA non-coding downstream 46295 9282858 ~ 9283089 (+)
G162441 NA non-coding downstream 47821 9284384 ~ 9284611 (+)
G162318 NA non-coding downstream 94883 9331446 ~ 9333904 (+)
G162137 NA other upstream 663838 8568010 ~ 8571726 (+)
G161986 NA other upstream 687239 8544582 ~ 8548325 (+)
G162088 NA other upstream 995960 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1362792 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 2033079 7200104 ~ 7202485 (+)
G162449 NA other downstream 119840 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 806230 10039358 ~ 10047210 (+)
G162297 NA other downstream 896736 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1254883 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1502018 10738087 ~ 10751548 (+)

Expression


Co-expression Network