G162438


Basic Information

Item Value
gene id G162438
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9281528 ~ 9281835 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184474
GGCAGGTGCATATCAATTATCCTTTCAGCTGTCCTAACAGTCTGTTGCAGTCTTTTTTTAATCTGATTTGCTGGCTGACCCAAACCAAACAGTTATAGAAGTGCACAGAACTGACTCAATAACAGCTGAGTAAAACTGTGTCATCAGAGCCTGTGGCAGGTTGAGCTTCCTCAGCTGCAAAGGAAGAACAGTCTCTGCTGAGCCTTTTTCACAATGAGTCAATGTGATTGTCCCACTTCAGATCCTGAGAGATGGTGGTGCCCAGGAACCTGAATGACTCCACTGCTGTCACAGTGCTGTTCATGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184474 True 308 lncRNA 0.46 1 9281528 9281835

Neighbor

gene id symbol gene type direction distance location
CI01000030_09259092_09261043 NA coding upstream 20485 9258216 ~ 9261043 (+)
CI01000030_09241979_09249271 NA coding upstream 32243 9241637 ~ 9249285 (+)
CI01000030_09214411_09224921 NA coding upstream 56587 9214280 ~ 9224941 (+)
CI01000030_09181881_09195357 NA coding upstream 85495 9181881 ~ 9196033 (+)
CI01000030_09169745_09175576 GPD1A, GPD1, GPD1B coding upstream 105297 9169649 ~ 9176231 (+)
CI01000030_09300172_09306760 NA coding downstream 17970 9299805 ~ 9307374 (+)
CI01000030_09308467_09315467 NA coding downstream 25977 9307812 ~ 9316060 (+)
CI01000030_09321409_09339033 NA coding downstream 39505 9321340 ~ 9339964 (+)
CI01000030_09361364_09379014 NA coding downstream 79200 9361035 ~ 9379721 (+)
CI01000030_09509234_09514703 NA coding downstream 226754 9508589 ~ 9516002 (+)
G162389 NA non-coding upstream 38789 9200234 ~ 9242739 (+)
G162432 NA non-coding upstream 44965 9235564 ~ 9236563 (+)
G162190 NA non-coding upstream 131144 9149706 ~ 9150384 (+)
G162202 NA non-coding upstream 241940 9031877 ~ 9039588 (+)
G162257 NA non-coding upstream 331835 8949464 ~ 8949693 (+)
G162439 NA non-coding downstream 1023 9282858 ~ 9283089 (+)
G162441 NA non-coding downstream 2549 9284384 ~ 9284611 (+)
G162318 NA non-coding downstream 49611 9331446 ~ 9333904 (+)
G162449 NA non-coding downstream 74923 9356403 ~ 9357014 (+)
G162137 NA other upstream 709802 8568010 ~ 8571726 (+)
G161986 NA other upstream 733203 8544582 ~ 8548325 (+)
G162088 NA other upstream 1041924 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1408756 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 2079043 7200104 ~ 7202485 (+)
CI01000030_10039688_10047019 NA other downstream 760958 10039358 ~ 10047210 (+)
G162297 NA other downstream 851464 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1209611 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1456746 10738087 ~ 10751548 (+)

Expression


Co-expression Network