G162500


Basic Information

Item Value
gene id G162500
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9539783 ~ 9540016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184560
ACAGAAAGAGATCAGTGAATTAGACAAGTCCAAGATCATCACAACAGCCAAAACACCTGATCAACTTCATGTTAGCTTTTTCCTGCCATAACAAATGTGCTTTATAAACACTCAGTTACAGCAGCCAGAGAAAGCTAATGTTAAAGAGTCAAGAGCCCAACTAAAGCAGACACTTGTCACCACGATGGTAACTGCAAACTTCAATACATTTTTATTTTCAATAAAACATCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184560 True 234 lncRNA 0.37 1 9539783 9540016

Neighbor

gene id symbol gene type direction distance location
CI01000030_09509234_09514703 NA coding upstream 23781 9508589 ~ 9516002 (+)
CI01000030_09361364_09379014 NA coding upstream 160062 9361035 ~ 9379721 (+)
CI01000030_09321409_09339033 NA coding upstream 199819 9321340 ~ 9339964 (+)
CI01000030_09308467_09315467 NA coding upstream 223723 9307812 ~ 9316060 (+)
CI01000030_09300172_09306760 NA coding upstream 232409 9299805 ~ 9307374 (+)
CI01000030_09598376_09634083 NA coding downstream 58138 9598154 ~ 9634480 (+)
CI01000030_09691687_09697272 NA coding downstream 150780 9690796 ~ 9697492 (+)
CI01000030_09724422_09740444 NA coding downstream 184339 9724355 ~ 9740578 (+)
CI01000030_09754796_09761721 NA coding downstream 214557 9754573 ~ 9763742 (+)
CI01000030_09799840_09805801 NA coding downstream 257987 9798003 ~ 9805819 (+)
G162488 NA non-coding upstream 33571 9504774 ~ 9506212 (+)
G162487 NA non-coding upstream 39892 9499416 ~ 9499891 (+)
G162486 NA non-coding upstream 41580 9497986 ~ 9498203 (+)
G162485 NA non-coding upstream 46227 9493314 ~ 9493556 (+)
G162484 NA non-coding upstream 51740 9487547 ~ 9488043 (+)
G162501 NA non-coding downstream 752 9540768 ~ 9541065 (+)
G162503 NA non-coding downstream 4708 9544724 ~ 9544938 (+)
CI01000030_09526436_09552770 NA non-coding downstream 7278 9526255 ~ 9554552 (+)
G162398 NA non-coding downstream 32412 9572428 ~ 9963252 (+)
G162413 NA non-coding downstream 48912 9588928 ~ 9592699 (+)
G162449 NA other upstream 182769 9356403 ~ 9357014 (+)
G162137 NA other upstream 968057 8568010 ~ 8571726 (+)
G161986 NA other upstream 991458 8544582 ~ 8548325 (+)
G162088 NA other upstream 1300179 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1667011 7868292 ~ 7886228 (+)
CI01000030_10039688_10047019 NA other downstream 502777 10039358 ~ 10047210 (+)
G162297 NA other downstream 593283 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 951430 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1198565 10738087 ~ 10751548 (+)
G162821 NA other downstream 1325996 10866012 ~ 10868440 (+)

Expression


Co-expression Network