G162398


Basic Information

Item Value
gene id G162398
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9572428 ~ 9963252 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184428
CTGAGTGAATCTGGCAGACTTGAGTGATGTTGAGATGTTTGATTTGGTTGCTGATGGGATTGTTCAGCACACAGCTGTAGGTGTTTTTATCCTGATATTCCACCTCCAGAGGTAGAGAGAGACTGATGCTGAGATCAGACACACTGATGCTGGACAATAAACTGTTTCCTTTGTACCAGGAGAGAGTCACATCACTCACATTCACAGCTGAACACACCAATGAACATGATGATGATGATGAAGAACATTGTGAAGAGTTACTGCTGATGACAGGAACAGGCAGACGAGCTGGAAAACATGAGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184428 True 306 lncRNA 0.44 2 9572428 9963252

Neighbor

gene id symbol gene type direction distance location
CI01000030_09526436_09552770 NA coding upstream 17876 9526255 ~ 9554552 (+)
CI01000030_09509234_09514703 NA coding upstream 56426 9508589 ~ 9516002 (+)
CI01000030_09361364_09379014 NA coding upstream 192707 9361035 ~ 9379721 (+)
CI01000030_09321409_09339033 NA coding upstream 232464 9321340 ~ 9339964 (+)
CI01000030_09308467_09315467 NA coding upstream 256368 9307812 ~ 9316060 (+)
CI01000030_09989586_10008913 NA coding downstream 26115 9989367 ~ 10009155 (+)
CI01000030_10039688_10047019 NA coding downstream 76106 10039358 ~ 10047210 (+)
CI01000030_10099125_10101681 NA coding downstream 135706 10098958 ~ 10102160 (+)
CI01000030_10134835_10135293 NA coding downstream 171583 10134835 ~ 10136130 (+)
CI01000030_10140982_10145096 NA coding downstream 176631 10139883 ~ 10145189 (+)
G162503 NA non-coding upstream 27490 9544724 ~ 9544938 (+)
G162501 NA non-coding upstream 31363 9540768 ~ 9541065 (+)
G162500 NA non-coding upstream 32412 9539783 ~ 9540016 (+)
G162488 NA non-coding upstream 66216 9504774 ~ 9506212 (+)
G162572 NA non-coding downstream 12065 9975317 ~ 10038293 (+)
G162574 NA non-coding downstream 19459 9982711 ~ 10019123 (+)
G162583 NA non-coding downstream 54646 10017898 ~ 10081460 (+)
G162350 NA non-coding downstream 124664 10087916 ~ 10095595 (+)
G162449 NA other upstream 215414 9356403 ~ 9357014 (+)
G162137 NA other upstream 1000702 8568010 ~ 8571726 (+)
G161986 NA other upstream 1024103 8544582 ~ 8548325 (+)
G162088 NA other upstream 1332824 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1699656 7868292 ~ 7886228 (+)
G162297 NA other downstream 170047 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 528194 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 775329 10738087 ~ 10751548 (+)
G162821 NA other downstream 902760 10866012 ~ 10868440 (+)

Expression


Co-expression Network