G162530


Basic Information

Item Value
gene id G162530
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9682368 ~ 9683664 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184592
GGTAAACCACTAACTTAAAACAAAAATTCAGACATCACAATGACACCAAAAGATATGATACAAAGAGTGAAAACAAAACTGAGACATCCTGGCAGAGAATAAATGTGAACAAAACATCTCTGGTTACCTAGCGTAACCTCGGTTCCCTGAGAGGAGGGAACGAGACACTGCGTCATAGCTTGACGATCGGGGTTATCCCCTCCTTCCTCTAATCTACTGAAGCCTTATGAAATCTCCAACCCGATCTCACAGCAATTAGTTTTTTGCTAAATCGTAACAGAGTGCAGCTGACAAAGACTCTGAGCTATGTAGCTTGTTCCCTCCTCTCAGAGAAGGGAACCCTGGGAAGGCTGCCCTAAGTTGGGGGGCTTGCTTATCACGTGAAGAGTGGGCGACTGAACCTTGAGAAGCCAGGCTATATCCTGAAGGGTTGGGTGAGAGTAATGTGGACACTTAGTCAGCATGAGCTCATCACCAGAGTTTCTAAGGTCCACCACTGTTAATGAGGGCAGATGGACTCATGCCGCACCGCTTCCGAGTGGGCATCACCCAGGCAGAAACACCGCAGTCCAGAAGGCATCTGAAAGAAAAGTAATACTCACTGGAACGCTGCAGGGGAGTGGCAATGAAGGCACCATCCCGTGGATGAGCATACCTCAACGGCGAGCTGTAGATGGCTTCTTGTAGCTGAAGAAAAAGATTCTGAAGCAATGGTGTTCAGCGCCGCCTCATAGCGCGGGGGAACCCACCTCAATTTCACGAGTTTAAACGCCATTGGCGGGCTTTCATAAGATTTCATAAGGCTTCAGTAGATTCGAGAAAAGAGGTGATAACCCCAAGCGTCAGCTATGATGCAGTGTCGAGAGACCGACTAGGGAACCAAAAGTGTAAAGCAGGGGTCACTTATTTCCATTAGTGACAGTATTTGATCATCGTTTTTTGGGGACATTTTCATACACTGCCTCCTTCTTCGATTTCTGAAAGGAAACACAAACTCAATCAGGAACCTGCTGATGCAACAGAAAATTAATAGAAGATCTTTCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184592 True 1047 lncRNA 0.47 2 9682368 9683664

Neighbor

gene id symbol gene type direction distance location
CI01000030_09598376_09634083 NA coding upstream 47888 9598154 ~ 9634480 (+)
CI01000030_09526436_09552770 NA coding upstream 127816 9526255 ~ 9554552 (+)
CI01000030_09509234_09514703 NA coding upstream 166366 9508589 ~ 9516002 (+)
CI01000030_09361364_09379014 NA coding upstream 302647 9361035 ~ 9379721 (+)
CI01000030_09321409_09339033 NA coding upstream 342404 9321340 ~ 9339964 (+)
CI01000030_09691687_09697272 NA coding downstream 7132 9690796 ~ 9697492 (+)
CI01000030_09724422_09740444 NA coding downstream 40691 9724355 ~ 9740578 (+)
CI01000030_09754796_09761721 NA coding downstream 70909 9754573 ~ 9763742 (+)
CI01000030_09799840_09805801 NA coding downstream 114339 9798003 ~ 9805819 (+)
CI01000030_09847512_09854804 NA coding downstream 163758 9847422 ~ 9855676 (+)
G162335 NA non-coding upstream 33794 9638538 ~ 9648574 (+)
G162413 NA non-coding upstream 89669 9588928 ~ 9592699 (+)
G162503 NA non-coding upstream 137430 9544724 ~ 9544938 (+)
G162501 NA non-coding upstream 141303 9540768 ~ 9541065 (+)
G162359 NA non-coding downstream 27354 9711018 ~ 9716656 (+)
G162539 NA non-coding downstream 128873 9812537 ~ 9822015 (+)
G162546 NA non-coding downstream 146755 9830419 ~ 9857715 (+)
G162399 NA non-coding downstream 150014 9833678 ~ 9837829 (+)
G162449 NA other upstream 325354 9356403 ~ 9357014 (+)
G162137 NA other upstream 1110642 8568010 ~ 8571726 (+)
G161986 NA other upstream 1134043 8544582 ~ 8548325 (+)
G162088 NA other upstream 1442764 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1809596 7868292 ~ 7886228 (+)
CI01000030_10039688_10047019 NA other downstream 359129 10039358 ~ 10047210 (+)
G162297 NA other downstream 449635 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 807782 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1054917 10738087 ~ 10751548 (+)
G162821 NA other downstream 1182348 10866012 ~ 10868440 (+)

Expression


Co-expression Network