G162359


Basic Information

Item Value
gene id G162359
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9711018 ~ 9716656 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184389
CGGAAATATCCTCTGGCGGTCAAACGTTGTATTAGTTTCATTTTTGAGGATCAGACCCACACTGAAGGAGGGACTCGAGACATTATCATCAGAGATATCAGAGATGTGGGCTCTTTTGACCAGTAAACAACCACCCACTCAGAGCACACTAGCATAGGTGGCTTTACAGAGCTGGAAATGGAGCAGGAACGGATATCTTGAGCAGTCCTCATGTATTTGTGTCTGATCTTTACCATTATCGGTGGAAACTTAAGATGCAGAAGATCCCGACGGCAGCAACAATCAACAGAGATCCAGCAGCAGCAGCAGCAGCAGCAGAAATCAACACTATCAGAGAGACTGAGACTGGAGGAACTGAAGGAGAGGAAAAGAGAGACAGTCATTAATGTGAGTGAATGTGTACAAAATCACATATATCAGCTTTGTCGTACCTGCACATGTGTGACAGAGTTGAGTGATGTCCAGATGTTGAGTCTGGTTGCTGATGGGATTGTTCAGCACACAGCTGTAGGTGTTTTTATCCTGATATTCCACCTCCAGAGGTAGAGAGAGACTGATGCTGAGATCAGACACACTGATGCTGGACAATAAACTGTTTCCTTTGTACCAGGAGAGAGTCACATGACTCACATTCACAGCTGAACACACCAATGAACAATTTGATGATGATGATGATGATGATGATGATGATGAACATTGTGAAGAGTTACTGCTGATGACAGGAACAGGCAGACGAGCTGAGAAACATGAGAGAATAAACAGAAATATGAACATGATAATTGATGTTGTGAATTGTAGTGAATTTGTTCAATAAGTTGTGTTGAGTGTTTGGAGTGTCGATGGCCACTGAATCTGTCATCTCAAACTCTAAAATGATTAAACATTTGAATTTGTAAATAGAATATGTAAATGTTTGGACAAAATGATGATCTCTACTCACCATAGACAGAAACACTGAATGTTTTTGTTGTCAGATGTGCTCCACTTATCTCTAGCTCATAAACTCCAGCATGTTCAGTTGTGATGTTTGTGATGGTCAGAGATCCAGTTTGATTGTCCAGCTTCAGTCTGTCTCTGAATCTCCCATCAGTACCGTTAGATGTGTTGAAGGTTTGGTTCTTTTTCCTCATTTTAGCTATGAGAGAGTTTTCAGCTCCAAATGCCCACTGTATGTTGTTGTCTTCATGTATTTCAGTATGATCAGTATATAAAGTGACAGAATCTCCTTCAATCACTGACAATGAATCACCAAACACACCTGATGAACAAACAGATTAAAGCCTCTGATGGTTTACAAAGACTGAAATCAGTTGAGAGTTAAGTTGAGAACAGCAGCAAAAACACAAAACAAAGCAGAAAGAGAAAACATTGCCGCAACACTTACAGATAGCTTGGAAATATATTTAAAGTAGCAATTAATGGAGTAATATGGCAGCATAGTTTATGAAAACATACAGATAACCACATATAACAAAATGTCACAACGCAGATCGCAGCTTAATGCTAGTGTTTTCTACCACAAGAATTATTATTATCCATTTCACAAATGTCAACTTTAAACCCAACACACAGTAATACACTAAATATTCATACTAAATATTCTAGGATATTTAATGGATTTAACACATGAATGCATTAACCCCCAGATATGAATTCAAAGCAAACAGGTTTTCTAAAACAGCAACAAGTTTTGGGGTCAAGCAAATTCCTTAAGGAGTTTAATTTAAAGTAACAGGGTTAAAGTTGATCTATTTTAAATGTTAAGTAACACTAGGTTCAAAATGATGATTTAAATGTAAGTCTGCTTATTTTACATTTTAAATTTTGGCATAACAGAATTATTAGAGAAACCTTGATTTAATCTAGATTGAAGCTTAATCCTTGCTGGTGGAACACATCCATAATCTTTCATTTGTTTTAAAGTGTAGAGGACAATCAGTTTTTAAAGTTTCATAATTTATTGACAATAAATACATGATAATTATTGCAGATTGAAAATACAATTTTAATTGTGCTGGATATTTTAAATAAATTTTTTTTAATAAATGAAAAATTTAGATCATTAGATCACTCCTATGCACTATAAGGTTCCTGCACATTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184389 True 2104 lncRNA 0.36 4 9711018 9716656

Neighbor

gene id symbol gene type direction distance location
CI01000030_09691687_09697272 NA coding upstream 13526 9690796 ~ 9697492 (+)
CI01000030_09598376_09634083 NA coding upstream 76538 9598154 ~ 9634480 (+)
CI01000030_09526436_09552770 NA coding upstream 156466 9526255 ~ 9554552 (+)
CI01000030_09509234_09514703 NA coding upstream 195016 9508589 ~ 9516002 (+)
CI01000030_09361364_09379014 NA coding upstream 331297 9361035 ~ 9379721 (+)
CI01000030_09724422_09740444 NA coding downstream 7699 9724355 ~ 9740578 (+)
CI01000030_09754796_09761721 NA coding downstream 37917 9754573 ~ 9763742 (+)
CI01000030_09799840_09805801 NA coding downstream 81347 9798003 ~ 9805819 (+)
CI01000030_09847512_09854804 NA coding downstream 130766 9847422 ~ 9855676 (+)
CI01000030_09876738_09883981 NA coding downstream 158629 9875285 ~ 9884005 (+)
G162530 NA non-coding upstream 27354 9682368 ~ 9683664 (+)
G162335 NA non-coding upstream 62444 9638538 ~ 9648574 (+)
G162413 NA non-coding upstream 118319 9588928 ~ 9592699 (+)
G162503 NA non-coding upstream 166080 9544724 ~ 9544938 (+)
G162539 NA non-coding downstream 95881 9812537 ~ 9822015 (+)
G162546 NA non-coding downstream 113763 9830419 ~ 9857715 (+)
G162399 NA non-coding downstream 117022 9833678 ~ 9837829 (+)
G162449 NA other upstream 354004 9356403 ~ 9357014 (+)
G162137 NA other upstream 1139292 8568010 ~ 8571726 (+)
G161986 NA other upstream 1162693 8544582 ~ 8548325 (+)
G162088 NA other upstream 1471414 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1838246 7868292 ~ 7886228 (+)
CI01000030_10039688_10047019 NA other downstream 326137 10039358 ~ 10047210 (+)
G162297 NA other downstream 416643 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 774790 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1021925 10738087 ~ 10751548 (+)
G162821 NA other downstream 1149356 10866012 ~ 10868440 (+)

Expression


Co-expression Network