G162563


Basic Information

Item Value
gene id G162563
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9941888 ~ 9965500 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184633
ATTGCTTCATTTGCATACTGCATAATAATATAGTTATGACTGTTACTAAGACTTTAAATGTGGATAATATATATTTATCATTTAACATAGTTTTTGAAAAGTAGTTCTAACTGTATTAAATGGCTCAACTAGTGATTTTAAAATTGTGTATATTTATTCAGTTCTCAATTTAAAAAAAAGTACAAAGTTAAAAGACCTCATTTAAGCTTCTGAGTCAAACTGAAACCTGCTGCAGTTGGTTTTTCTTTCTTTTTTTTGTGGACAAGCATCTCATGAGTGAGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184633 True 285 lncRNA 0.28 2 9941888 9965500

Neighbor

gene id symbol gene type direction distance location
CI01000030_09922237_09930221 NA coding upstream 11520 9922049 ~ 9930368 (+)
CI01000030_09876738_09883981 NA coding upstream 57883 9875285 ~ 9884005 (+)
CI01000030_09847512_09854804 NA coding upstream 86212 9847422 ~ 9855676 (+)
CI01000030_09799840_09805801 NA coding upstream 136069 9798003 ~ 9805819 (+)
CI01000030_09754796_09761721 NA coding upstream 178146 9754573 ~ 9763742 (+)
CI01000030_09989586_10008913 NA coding downstream 23867 9989367 ~ 10009155 (+)
CI01000030_10039688_10047019 NA coding downstream 73858 10039358 ~ 10047210 (+)
CI01000030_10099125_10101681 NA coding downstream 133458 10098958 ~ 10102160 (+)
CI01000030_10134835_10135293 NA coding downstream 169335 10134835 ~ 10136130 (+)
CI01000030_10140982_10145096 NA coding downstream 174383 10139883 ~ 10145189 (+)
G162550 NA non-coding upstream 77924 9859491 ~ 9863964 (+)
G162546 NA non-coding upstream 84173 9830419 ~ 9857715 (+)
G162399 NA non-coding upstream 104059 9833678 ~ 9837829 (+)
G162539 NA non-coding upstream 119873 9812537 ~ 9822015 (+)
G162572 NA non-coding downstream 9817 9975317 ~ 10038293 (+)
G162574 NA non-coding downstream 17211 9982711 ~ 10019123 (+)
G162583 NA non-coding downstream 52398 10017898 ~ 10081460 (+)
G162350 NA non-coding downstream 122416 10087916 ~ 10095595 (+)
G162449 NA other upstream 584874 9356403 ~ 9357014 (+)
G162137 NA other upstream 1370162 8568010 ~ 8571726 (+)
G161986 NA other upstream 1393563 8544582 ~ 8548325 (+)
G162088 NA other upstream 1702284 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 2069116 7868292 ~ 7886228 (+)
G162297 NA other downstream 167799 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 525946 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 773081 10738087 ~ 10751548 (+)
G162821 NA other downstream 900512 10866012 ~ 10868440 (+)

Expression


Co-expression Network