G162605


Basic Information

Item Value
gene id G162605
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10106728 ~ 10404016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184682
CGTAGAGTTATGTTTTGTAAATATGCTTTTGAATATACAGTACTTATGGAAGGAATTTCTGTTGCCATTGGTCATTGATTCACTGTACTTTGCTTTTGATCCCCTTTAATTTCTTCAAGGCTCATTACTGTTTCTGCCAGTGAAGGAGACACAGGTGCAGAGTCAAATCAAATAAATACATGTATTAAAGGGGTGTCTAAACTCGGTGCTGGAGGGCCACTGTCCTGTAGGGTTTAACCAAAGCCACTGGAAGACAAGCCTGCAACCTTTAGCCAAAAAAGCGCAACGGCTAATGCTAACGCTCCGCCTCTGGCGGTACACAGGGAAGGAGACCAGAGGCTGTTTTTTGAATGGATGTCAATGGATGAGAGGCTTCACTATGCTGATTAAACAGCTTTTGTGGGGAAATAGCTAATCATTTAATTAATCAACAGCCTGTTTGTTAATCTTCAGCATGTTTTACACTAAACAATACTTTCTTTGGGAACTATATGTAAATTTTAGCTTGATAAAAATGTATTTTTTTCAAGAGAAGGCAGACTAGGGAATGTTGCGACCAGAGGTGGACAATCCAGGGGTCAGAAAGTAAAAGTCCTGCCATATTTTTATTCCACCCACTGTAGCAGTGTTAAAGTTAATGAAATAATTAAGTAATTAACTGAGTGATGATTGACCGTTATTGAAGACACCTGATGATAACAAGCAGAATCACCAAAGGAGAAAAATCACAATTTTAGTCACCATCATGTAGATCAGTGTTTGATTTAGTTGGGCTCTTGACCCTTGACTTTTTAATATTAGATTTTGTTTGGGCTGTTGTAACTGAGTTATAACATAACTCAGTTATGTTATACAGTTTCTGAGTGTTATTTTTTTAATTTTATTTTAGGAAATAAAATTTGTGTAAGCTACATAAACTGTTTGTGTAGTCCCTTTTGTACATTCTGACCTTAGACCATGGATGTTTTTTGTTTTATTAGGTAAGATCCTCAATCATTAGCATTGTTAACACAGTATCTAAACAAAAATTCCAGTGTTAAATGAACTCTCCTGGGAGTATATGTGAGACCACACTTAAGAGTGTTAGTGTTAAAATAAGAGTTAAATGAGTAATGTAGGTATAAATTAAGCTTAAAAGAATCTATAATATATCTGGCATATTAGTATTGTTTCTAATAAATGAACACTGAAGCACTGTTAAAGTTTATGAGATATTAGGTTACTAATTGAGTGACGACTGACCGTTATTGAATGAATGAGAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184682 True 1265 lncRNA 0.35 2 10106728 10404016

Neighbor

gene id symbol gene type direction distance location
CI01000030_10099125_10101681 NA coding upstream 4568 10098958 ~ 10102160 (+)
CI01000030_10039688_10047019 NA coding upstream 59518 10039358 ~ 10047210 (+)
CI01000030_09989586_10008913 NA coding upstream 97573 9989367 ~ 10009155 (+)
CI01000030_09922237_09930221 NA coding upstream 176360 9922049 ~ 9930368 (+)
CI01000030_09876738_09883981 NA coding upstream 222723 9875285 ~ 9884005 (+)
CI01000030_10422761_10426202 NA coding downstream 18636 10422652 ~ 10426252 (+)
CI01000030_10473378_10509560 NA coding downstream 67819 10471835 ~ 10511071 (+)
CI01000030_10537146_10539791 NA coding downstream 132175 10536191 ~ 10540258 (+)
CI01000030_10540503_10543066 NA coding downstream 136280 10540296 ~ 10543215 (+)
CI01000030_10567314_10570556 NA coding downstream 160378 10564394 ~ 10570573 (+)
G162350 NA non-coding upstream 11133 10087916 ~ 10095595 (+)
G162583 NA non-coding upstream 25268 10017898 ~ 10081460 (+)
G162572 NA non-coding upstream 68435 9975317 ~ 10038293 (+)
G162574 NA non-coding upstream 87605 9982711 ~ 10019123 (+)
G162401 NA non-coding downstream 18913 10422929 ~ 10429547 (+)
G162679 NA non-coding downstream 46473 10450489 ~ 10451083 (+)
G162366 NA non-coding downstream 109872 10513888 ~ 10515816 (+)
G162694 NA non-coding downstream 118288 10522304 ~ 10564317 (+)
G162449 NA other upstream 749714 9356403 ~ 9357014 (+)
G162137 NA other upstream 1535002 8568010 ~ 8571726 (+)
G161986 NA other upstream 1558403 8544582 ~ 8548325 (+)
G162088 NA other upstream 1867124 8237965 ~ 8239604 (+)
CI01000030_10738658_10751094 NA other downstream 334565 10738087 ~ 10751548 (+)
G162821 NA other downstream 461996 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 936739 11362114 ~ 11380772 (+)
G162951 NA other downstream 1088585 11492601 ~ 11496119 (+)

Expression


Co-expression Network