G162334


Basic Information

Item Value
gene id G162334
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10115690 ~ 10131571 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184364
GCATGAAATCAAACAGCAGAAGAACATCATTTATTAACACATTTATGATCTTACACATCACTCACAAACACCTTCTCATACAAAAATCCCCTTCCCACACAATAGAGATCATTGCTTGTTTTATCTAGACCATGGTTAAAATTATTTTATTGTTATTTTCCACCATATTAATGTTTTTTTTTTTTTAAATTAATTTCTTTTTAATTCTACAGTATCAATGCTTTTTTTATTTACAGAATCTGGTTTATCAGCTCTTGAAAGTTTTAGACTGATTTAAAAGAACAATTCAAACTATTTTGACTGTTCCTCTTAAATGTTAATTAGCGATTCAGAATAAATGACCAGGACACAATTTTACATGCTATAATTTGTTACAGCAACCTCATCAAATAACAAATTTATACTAAACCCTTAAATATTTAAAATAGCAATAGATAAAAATGAATAAAACTGAATAAATTCAAACTGGGTCATGTCCAAACTACACTTTTGGTTTCATTATCATTCAGAAAAGACACTGTAACAAATAAATGCACTTACCAGCCACTAACACACACACTAAGAGCAAAATAAAGACCATCATTTTACAAAAGTCACAGAACACTGAATCTGTGGAAATAAAAGATTTTGTCCATGTAAATGCACAAGTAAAATTGTGTTCTTCTGAAACTGAAAGCGGTTTATGACTAGTTGTGTCTGTACCTGCTTGTTTTGCTGACGTATACCCAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184364 True 732 lncRNA 0.30 2 10115690 10131571

Neighbor

gene id symbol gene type direction distance location
CI01000030_10099125_10101681 NA coding upstream 13530 10098958 ~ 10102160 (+)
CI01000030_10039688_10047019 NA coding upstream 68480 10039358 ~ 10047210 (+)
CI01000030_09989586_10008913 NA coding upstream 106535 9989367 ~ 10009155 (+)
CI01000030_09922237_09930221 NA coding upstream 185322 9922049 ~ 9930368 (+)
CI01000030_09876738_09883981 NA coding upstream 231685 9875285 ~ 9884005 (+)
CI01000030_10134835_10135293 NA coding downstream 3264 10134835 ~ 10136130 (+)
CI01000030_10140982_10145096 NA coding downstream 8312 10139883 ~ 10145189 (+)
CI01000030_10148536_10153337 NA coding downstream 15646 10147217 ~ 10153439 (+)
CI01000030_10164557_10167430 NA coding downstream 32793 10164364 ~ 10169382 (+)
CI01000030_10178017_10185588 NA coding downstream 43905 10175476 ~ 10188119 (+)
G162350 NA non-coding upstream 20095 10087916 ~ 10095595 (+)
G162583 NA non-coding upstream 34230 10017898 ~ 10081460 (+)
G162572 NA non-coding upstream 77397 9975317 ~ 10038293 (+)
G162634 NA non-coding downstream 62526 10194097 ~ 10195201 (+)
G162633 NA non-coding downstream 97073 10228644 ~ 10238283 (+)
G162632 NA non-coding downstream 105555 10237126 ~ 10237654 (+)
G162650 NA non-coding downstream 153092 10284663 ~ 10299194 (+)
G162355 NA non-coding downstream 166102 10297673 ~ 10490876 (+)
G162449 NA other upstream 758676 9356403 ~ 9357014 (+)
G162137 NA other upstream 1543964 8568010 ~ 8571726 (+)
G161986 NA other upstream 1567365 8544582 ~ 8548325 (+)
G162088 NA other upstream 1876086 8237965 ~ 8239604 (+)
G162297 NA other downstream 1728 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 359875 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 607010 10738087 ~ 10751548 (+)
G162821 NA other downstream 734441 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 1209184 11362114 ~ 11380772 (+)

Expression


Co-expression Network