G162634


Basic Information

Item Value
gene id G162634
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10194097 ~ 10195201 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184720
TGATCGTTTCACTCCCTTTATCTGTAGTTTATAATCTCCAGCATGTTCAGTTCTGGTGTTCATGATGGTCAGAGATCCAGTTTGATTGTCCAGCTTCAGTCTGTCTCTGAATCTCCCATCAGGACCATCAGATGTGGAGAAGATTCGGTTCTCAATGCTGATTTTAGCTATGAGAGAGTTTTCAGATCCAAATTTCCACAGTATGTCGTCGTCTTCATGCATTTCAGTAACATTAGTGTATAAAGTGACAGAATCTCCCTCCATCACTGACACTGAATCACCAAACACACCAGTTTTACTGACATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184720 True 308 lncRNA 0.41 2 10194097 10195201

Neighbor

gene id symbol gene type direction distance location
CI01000030_10178017_10185588 NA coding upstream 5978 10175476 ~ 10188119 (+)
CI01000030_10164557_10167430 NA coding upstream 24715 10164364 ~ 10169382 (+)
CI01000030_10148536_10153337 NA coding upstream 40658 10147217 ~ 10153439 (+)
CI01000030_10140982_10145096 NA coding upstream 48908 10139883 ~ 10145189 (+)
CI01000030_10134835_10135293 NA coding upstream 57967 10134835 ~ 10136130 (+)
CI01000030_10199403_10226165 NA coding downstream 3910 10199111 ~ 10226880 (+)
CI01000030_10246173_10256836 NA coding downstream 49209 10244410 ~ 10256912 (+)
CI01000030_10259762_10274068 NA coding downstream 64513 10259714 ~ 10274169 (+)
CI01000030_10304328_10313568 NA coding downstream 109127 10304328 ~ 10313627 (+)
CI01000030_10333687_10335629 NA coding downstream 138317 10333518 ~ 10335792 (+)
G162334 NA non-coding upstream 62526 10115690 ~ 10131571 (+)
G162350 NA non-coding upstream 98502 10087916 ~ 10095595 (+)
G162583 NA non-coding upstream 112637 10017898 ~ 10081460 (+)
G162572 NA non-coding upstream 155804 9975317 ~ 10038293 (+)
G162633 NA non-coding downstream 33443 10228644 ~ 10238283 (+)
G162632 NA non-coding downstream 41925 10237126 ~ 10237654 (+)
G162650 NA non-coding downstream 89462 10284663 ~ 10299194 (+)
G162355 NA non-coding downstream 102472 10297673 ~ 10490876 (+)
G162319 NA non-coding downstream 119938 10315139 ~ 10316965 (+)
CI01000030_10039688_10047019 NA other upstream 148214 10039358 ~ 10047210 (+)
G162449 NA other upstream 837083 9356403 ~ 9357014 (+)
G162137 NA other upstream 1622371 8568010 ~ 8571726 (+)
G161986 NA other upstream 1645772 8544582 ~ 8548325 (+)
G162088 NA other upstream 1954493 8237965 ~ 8239604 (+)
CI01000030_10473378_10509560 NA other downstream 296245 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 543380 10738087 ~ 10751548 (+)
G162821 NA other downstream 670811 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 1145554 11362114 ~ 11380772 (+)
G162951 NA other downstream 1297400 11492601 ~ 11496119 (+)

Expression


Co-expression Network