G162661


Basic Information

Item Value
gene id G162661
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10357103 ~ 10372898 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184749
CTGGAGCAAAGATAAAGTGAAAAGCCTAATTGAAATTTGGTCAAAGATTTTTCAGAACAACTGTTCAAAACACACAAGAATACCAACGAACCCTTGATTCTTGCTCACAATGATAAAGTAATAACATCAGCAAAGAAAGCCACAATAAGCCCATGGATCTGTTGTCTGTCCATCCTGACAAATGACCGTTATGAGCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184749 True 200 lncRNA 0.38 2 10357103 10372898

Neighbor

gene id symbol gene type direction distance location
CI01000030_10333687_10335629 NA coding upstream 21311 10333518 ~ 10335792 (+)
CI01000030_10304328_10313568 NA coding upstream 43476 10304328 ~ 10313627 (+)
CI01000030_10259762_10274068 NA coding upstream 82934 10259714 ~ 10274169 (+)
CI01000030_10246173_10256836 NA coding upstream 100191 10244410 ~ 10256912 (+)
CI01000030_10199403_10226165 NA coding upstream 130223 10199111 ~ 10226880 (+)
CI01000030_10422761_10426202 NA coding downstream 49754 10422652 ~ 10426252 (+)
CI01000030_10473378_10509560 NA coding downstream 98937 10471835 ~ 10511071 (+)
CI01000030_10537146_10539791 NA coding downstream 163293 10536191 ~ 10540258 (+)
CI01000030_10540503_10543066 NA coding downstream 167398 10540296 ~ 10543215 (+)
CI01000030_10567314_10570556 NA coding downstream 191496 10564394 ~ 10570573 (+)
G162408 NA non-coding upstream 2840 10344281 ~ 10354263 (+)
G162319 NA non-coding upstream 40138 10315139 ~ 10316965 (+)
G162650 NA non-coding upstream 57909 10284663 ~ 10299194 (+)
G162633 NA non-coding upstream 118820 10228644 ~ 10238283 (+)
G162632 NA non-coding upstream 119449 10237126 ~ 10237654 (+)
G162401 NA non-coding downstream 50031 10422929 ~ 10429547 (+)
G162679 NA non-coding downstream 77591 10450489 ~ 10451083 (+)
G162366 NA non-coding downstream 140990 10513888 ~ 10515816 (+)
G162694 NA non-coding downstream 149406 10522304 ~ 10564317 (+)
G162297 NA other upstream 135879 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 311220 10039358 ~ 10047210 (+)
G162449 NA other upstream 1000089 9356403 ~ 9357014 (+)
G162137 NA other upstream 1785377 8568010 ~ 8571726 (+)
G161986 NA other upstream 1808778 8544582 ~ 8548325 (+)
CI01000030_10738658_10751094 NA other downstream 365683 10738087 ~ 10751548 (+)
G162821 NA other downstream 493114 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 967857 11362114 ~ 11380772 (+)
G162951 NA other downstream 1119703 11492601 ~ 11496119 (+)

Expression


Co-expression Network