G162679


Basic Information

Item Value
gene id G162679
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10450489 ~ 10451083 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184768
GCAAAAAGATAACTCAAAAAGTTAAGTTGAGTGAATGAATTTTTAGATTTATTTTATTTATTTATTTATTTTTTACAGTGCAGTGCACTCAGTACTTAATGAATTAAGAGGCCTGTCCTATGGTCAGGCTTTTGGTATAGAATTACAGTGTCAGAGAGAAATGCATCAGGTACTCATTTTTAATTATGCCGTATTAAGAACAATTGGCAATAAATATGCCAGATTTGTGATATAATAGACTGAACTGTAAATCCACTAAATAATCCGACTGTGTAAGTAATCCAAACAACCTCACATGCATGCAGCTGATCCATGTAGTCAAATGTCAAGCTACATTTATGAATACAACTCATTATAACCAGTGCACTAATGTGCCATTCTATTTCTAACACACTAAGGATTTGTACTATATCTGACAACACGACACAGCAAAATCTCCAGTGTTAAATTAACACCTAAAGTGTACATATGAGTCCATCTTACCGGGTGTTAAAAAGTAACACTGAAGCAGTGTTAAAGTTAATGAAATAATTGATTGATGATTGAGTGATGATTGACAATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184768 True 564 lncRNA 0.33 2 10450489 10451083

Neighbor

gene id symbol gene type direction distance location
CI01000030_10422761_10426202 NA coding upstream 24237 10422652 ~ 10426252 (+)
CI01000030_10333687_10335629 NA coding upstream 114697 10333518 ~ 10335792 (+)
CI01000030_10304328_10313568 NA coding upstream 136862 10304328 ~ 10313627 (+)
CI01000030_10259762_10274068 NA coding upstream 176320 10259714 ~ 10274169 (+)
CI01000030_10246173_10256836 NA coding upstream 193577 10244410 ~ 10256912 (+)
CI01000030_10473378_10509560 NA coding downstream 20752 10471835 ~ 10511071 (+)
CI01000030_10537146_10539791 NA coding downstream 85108 10536191 ~ 10540258 (+)
CI01000030_10540503_10543066 NA coding downstream 89213 10540296 ~ 10543215 (+)
CI01000030_10567314_10570556 NA coding downstream 113311 10564394 ~ 10570573 (+)
CI01000030_10581114_10588932 NA coding downstream 129530 10580613 ~ 10589621 (+)
G162401 NA non-coding upstream 20942 10422929 ~ 10429547 (+)
G162605 NA non-coding upstream 46473 10106728 ~ 10404016 (+)
G162661 NA non-coding upstream 77591 10357103 ~ 10372898 (+)
G162662 NA non-coding upstream 92170 10358042 ~ 10358319 (+)
G162408 NA non-coding upstream 96226 10344281 ~ 10354263 (+)
G162366 NA non-coding downstream 62805 10513888 ~ 10515816 (+)
G162694 NA non-coding downstream 71221 10522304 ~ 10564317 (+)
G162722 NA non-coding downstream 190722 10641805 ~ 10642033 (+)
G162297 NA other upstream 229265 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 404606 10039358 ~ 10047210 (+)
G162449 NA other upstream 1093475 9356403 ~ 9357014 (+)
G162137 NA other upstream 1878763 8568010 ~ 8571726 (+)
G161986 NA other upstream 1902164 8544582 ~ 8548325 (+)
CI01000030_10738658_10751094 NA other downstream 287498 10738087 ~ 10751548 (+)
G162821 NA other downstream 414929 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 889672 11362114 ~ 11380772 (+)
G162951 NA other downstream 1041518 11492601 ~ 11496119 (+)

Expression


Co-expression Network