G162761


Basic Information

Item Value
gene id G162761
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11315602 ~ 11350125 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184862
TGGTTTGATCTGTCTGGTGGATAAACAGCTTCTGCTGGATGTTTGTGGGTGAAGTGTTTTTTTTTTCCAAGTGCGATAAACTCTACACGCTTTCACTGTGTGATGTAGCCTATTAAAATGCAGTTAGAATTCACCCAAACGTCAAGATGTGAGGATAAAATATCTGTTTGACATTTCATATCTTTTTATACTTATGTCATATGACCAAGTTAAGCAATATCACATGAGCAAAAGTGCTGATTTCCTGAACATCAGCACGATTGCAAACGTGATGTTTATTAATCTGTTGCATAAAACAAATAAGCAGTTAACACTGAGTTACATTTTAGACACAACATTATCTGTTTTCGCTGTTTTCCACGAATATCGTTCCAAACAAATCCACAGAAGAGTAGTCGCACATCTCTGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184862 True 411 lncRNA 0.36 2 11315602 11350125

Neighbor

gene id symbol gene type direction distance location
CI01000030_11289568_11298414 NA coding upstream 17125 11287870 ~ 11298477 (+)
CI01000030_11278476_11281567 NA coding upstream 33859 11278396 ~ 11281743 (+)
CI01000030_11211094_11214554 NA coding upstream 100904 11209308 ~ 11214698 (+)
CI01000030_11184734_11195838 NA coding upstream 119737 11182706 ~ 11195865 (+)
CI01000030_11168935_11171909 NA coding upstream 143297 11168410 ~ 11172305 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B coding downstream 11989 11362114 ~ 11380772 (+)
CI01000030_11382916_11385905 NA coding downstream 32246 11382371 ~ 11386339 (+)
CI01000030_11437923_11444045 NA coding downstream 87502 11437627 ~ 11444049 (+)
CI01000030_11464522_11490298 FBN2B coding downstream 114397 11464522 ~ 11490628 (+)
CI01000030_11550703_11555403 UHRF1 coding downstream 200578 11550703 ~ 11555596 (+)
G162912 NA non-coding upstream 23507 11260148 ~ 11292095 (+)
G162763 NA non-coding upstream 47780 11265536 ~ 11267822 (+)
G162895 NA non-coding upstream 61873 11246668 ~ 11253729 (+)
G162891 NA non-coding upstream 63506 11225660 ~ 11252096 (+)
G162893 NA non-coding upstream 78683 11234723 ~ 11236919 (+)
G162954 NA non-coding downstream 41195 11391320 ~ 11391618 (+)
G162955 NA non-coding downstream 41514 11391639 ~ 11395583 (+)
G162964 NA non-coding downstream 61257 11411382 ~ 11423557 (+)
G162974 NA non-coding downstream 83670 11433795 ~ 11434026 (+)
G162975 NA non-coding downstream 83923 11434048 ~ 11434264 (+)
G162821 NA other upstream 447162 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 575051 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 813959 10471835 ~ 10511071 (+)
G162297 NA other upstream 1094378 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 1269719 10039358 ~ 10047210 (+)
G162951 NA other downstream 142476 11492601 ~ 11496119 (+)

Expression


Co-expression Network