G162955


Basic Information

Item Value
gene id G162955
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11391639 ~ 11395583 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU185090
CAACCATCGGCTGAGCGGCAGCGCCACAACCCTTTCAAAAACAAAACGCAGGGCAATGAAACCCAGGGCCAAAGGCAGGGAGATGAGCAGGTCGCGGGGTACGGGATGCCGACTTCCATCCAATGTCCCCTCTGCGATATCTTTCCATGTGACGCCAGGAGAAAGCCAGAAGTCCTGCCGCCATATCCACTGGTTTACAAGTTCCTCTAGTCTGTCCATGCTTCAAGGATGAGAGGCGATAATGGATATCGATTAAAGCAGGACACAGGCCTCTTCAAAGCGTATTTGCGTTTTTTTTTTTTTATTCCCGTTCTTCGATATAAACAGCATCCAGCATCATGATCGCTCTGAATCGAAATAAAAACAATCCCTCGCGCTGATTCTTCCGGCGAATATTCATTCGTAGGAATGCGCGCGACCCTGTTGACGACGTCAACTCACGTCCACCACATAGACCTCTGTTTTTGAGTCTTTTAGGAGCTTCCAAGAGTAAAATTGGTCCTGCATTCATGAAATTATCCCAGAGTCGAGAGAACCGATGAAAACGCCCGAGAAACGGGAGCTTTTAGCAGCAGCCGCAGCATCTCCTCCGTCTTTCTCTCCATCAGGGAGGAAACATGCTGTAAGGTGCTTTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185090 True 637 lncRNA 0.49 3 11391639 11395583

Neighbor

gene id symbol gene type direction distance location
CI01000030_11382916_11385905 NA coding upstream 5300 11382371 ~ 11386339 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B coding upstream 10867 11362114 ~ 11380772 (+)
CI01000030_11333340_11346098 NA coding upstream 45432 11333253 ~ 11346207 (+)
CI01000030_11316738_11317918 NA coding upstream 73680 11316495 ~ 11317959 (+)
CI01000030_11289568_11298414 NA coding upstream 93162 11287870 ~ 11298477 (+)
CI01000030_11437923_11444045 NA coding downstream 42044 11437627 ~ 11444049 (+)
CI01000030_11464522_11490298 FBN2B coding downstream 68939 11464522 ~ 11490628 (+)
CI01000030_11550703_11555403 UHRF1 coding downstream 155120 11550703 ~ 11555596 (+)
CI01000030_11563241_11581907 KDM4B coding downstream 167658 11563241 ~ 11581907 (+)
G162954 NA non-coding upstream 21 11391320 ~ 11391618 (+)
G162761 NA non-coding upstream 41514 11315602 ~ 11350125 (+)
G162912 NA non-coding upstream 99544 11260148 ~ 11292095 (+)
G162763 NA non-coding upstream 123817 11265536 ~ 11267822 (+)
G162895 NA non-coding upstream 137910 11246668 ~ 11253729 (+)
G162964 NA non-coding downstream 15799 11411382 ~ 11423557 (+)
G162974 NA non-coding downstream 38212 11433795 ~ 11434026 (+)
G162975 NA non-coding downstream 38465 11434048 ~ 11434264 (+)
G162821 NA other upstream 523199 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 651088 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 889996 10471835 ~ 10511071 (+)
G162297 NA other upstream 1170415 10133299 ~ 10221224 (+)
G162951 NA other downstream 97018 11492601 ~ 11496119 (+)

Expression


Co-expression Network