G162964


Basic Information

Item Value
gene id G162964
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11411382 ~ 11423557 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU185100
AAGAAATTGATGTAGATGATCTCTGGAAATTATTCAGTTCTGCTGAATCTCCGTTGTGTTTCTGAACAGCGGTATGCACTGCTTCCAGTAAAACGCAGATCGCGGTCTGCGCAGAACCGCATCAGTCGAAGACAAGCATCCGTTTGGGTAGTGCACCAACTTTTTTTTTTTTTTTTNNNNNNNNNNTTTATTTTTTTACTTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC108431875

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185100 True 202 lncRNA 0.38 2 11411382 11423557

Neighbor

gene id symbol gene type direction distance location
CI01000030_11382916_11385905 NA coding upstream 25043 11382371 ~ 11386339 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B coding upstream 30610 11362114 ~ 11380772 (+)
CI01000030_11333340_11346098 NA coding upstream 65175 11333253 ~ 11346207 (+)
CI01000030_11316738_11317918 NA coding upstream 93423 11316495 ~ 11317959 (+)
CI01000030_11289568_11298414 NA coding upstream 112905 11287870 ~ 11298477 (+)
CI01000030_11437923_11444045 NA coding downstream 14070 11437627 ~ 11444049 (+)
CI01000030_11464522_11490298 FBN2B coding downstream 40965 11464522 ~ 11490628 (+)
CI01000030_11550703_11555403 UHRF1 coding downstream 127146 11550703 ~ 11555596 (+)
CI01000030_11563241_11581907 KDM4B coding downstream 139684 11563241 ~ 11581907 (+)
G162955 NA non-coding upstream 15799 11391639 ~ 11395583 (+)
G162954 NA non-coding upstream 19764 11391320 ~ 11391618 (+)
G162761 NA non-coding upstream 61257 11315602 ~ 11350125 (+)
G162912 NA non-coding upstream 119287 11260148 ~ 11292095 (+)
G162763 NA non-coding upstream 143560 11265536 ~ 11267822 (+)
G162974 NA non-coding downstream 10238 11433795 ~ 11434026 (+)
G162975 NA non-coding downstream 10491 11434048 ~ 11434264 (+)
G162821 NA other upstream 542942 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 670831 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 909739 10471835 ~ 10511071 (+)
G162297 NA other upstream 1190158 10133299 ~ 10221224 (+)
G162951 NA other downstream 69044 11492601 ~ 11496119 (+)

Expression


Co-expression Network