CI01000033_00306473_00307958


Basic Information

Item Value
gene id CI01000033_00306473_00307958
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 306333 ~ 307958 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000033_00306473_00307958.mRNA
ATGGCCCATTGCTCCAAACTTTTTGCTGCATGTTGTGACCCAAATGGGACAAATTCTGAGGCACTGAGACAACTGGCCAAAAAGCATCCAGGTGCTGTCACCCTTGAGCACCTTGTATCAGAATCTGCCAAGAAAGTGGGTTCTCTACTGGGCAAGAATGGTTTGAACCTGATCATAAATAATGCTGCAGTGTTGCCTTCAAAATCCATGTGGACCGCCACTGTTGAGGACATGATCCACGCCTTCAACACCAACATGTTAGGACCTTTATTTGTCATTAGGGAGTACCTGCCGTATCTGCGTGCAGCAGCTAAAGTCAGTGGCAAACCAGGGATGTCATGTGATAAAGCAGCTGTGATCAACATCTCCACAGATGCAGCATCTATGGGCATCTTTCCTTTACTTCAAGTGCCATTCCCATTCTTCCCATACAGTATCAGCAAGGCCCCTATCGACGCCAGAGAAAGCGTGGAGGGGATGCTGCGTGTCATTAACAGCCTTACCGAGAAGCAGCACTGTCTATTCATGGACTACACTAGAAAAACATTGCCCTGGTAAAACAGAGAAACAAAATCTCTCTAGTTAGGAAGGTCAGCAAAAGTCTGATCCAGATGTCATATTTTTACCTCCCTTTTTAAATGATGAACACTTAACAAACAACATGACAACTTAATTCCCCAAGTGTTTGTAACAATAAA

Function

NR:

description
Zgc:92161

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000033_00306473_00307958.mRNA True 698 mRNA 0.45 5 306333 307958

Neighbor

gene id symbol gene type direction distance location
CI01000033_00295796_00298229 NA coding downstream 8101 295679 ~ 298232 (-)
CI01000033_00275565_00294358 NA coding downstream 11975 275386 ~ 294358 (-)
CI01000033_00313235_00315162 NA coding upstream 5102 313060 ~ 315188 (-)
CI01000033_00326195_00369841 NA coding upstream 18179 326137 ~ 369841 (-)
CI01000033_00415100_00423953 QTRT1.S, QTRT1 coding upstream 106994 414952 ~ 423953 (-)
CI01000033_00482628_00490027 TMED1A coding upstream 174307 482265 ~ 490027 (-)
CI01000033_00509701_00513969 NA coding upstream 201435 509393 ~ 514281 (-)
G168164 NA non-coding downstream 917 305142 ~ 305416 (-)
G168163 NA non-coding downstream 1381 304678 ~ 304952 (-)
G168125 NA non-coding downstream 75414 227506 ~ 230919 (-)
G168006 NA non-coding downstream 289609 16435 ~ 16724 (-)
G168167 NA non-coding upstream 4460 312418 ~ 312731 (-)
G168168 NA non-coding upstream 12189 320147 ~ 320490 (-)
G168178 NA non-coding upstream 169152 477110 ~ 478465 (-)
G168182 NA non-coding upstream 191052 499010 ~ 500751 (-)
G168206 NA non-coding upstream 210072 518030 ~ 518283 (-)
G168237 NA other upstream 449413 757371 ~ 771591 (-)
G168847 NA other upstream 917630 1225588 ~ 1229549 (-)

Expression


Co-expression Network