CI01000034_00821815_00825192


Basic Information

Item Value
gene id CI01000034_00821815_00825192
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 820595 ~ 825205 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_00821815_00825192.mRNA
TTATAAATACGTTTAAATAAGTGGGAAAAAAATCTGCCAGTGCAGTAAGACAAAATAAACTAATATTTAAGATACAATCTATGAAAGTCTTATATCTAAGTTTCACTTTGAAAAGTAAACTTATCTTATTTTAAGGATTTCTATATATATTTACATGGATAATAAATACAATTTATAAATAAAAATGGTAAAAAAGCTAAAAACCCATTAAGTCTAATATACAGATATTAGGAGTAATAATTTGTTGTGGTATTGTTCAGAATATTTCTATTTCTTTTCTATTTAATTTTTTTTTTTAAATGTAATTAATTCCTGTAATGGCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATTCTTGAGAAATCAATCTAATATGCTGATATGATGCTCAAGAAACATTTGGAAAACAGTTCTGCTTAATATTTTTGAGGAAACCATGACTTTTGTCAGAATTCTTTGATGATTTCCTTGAATTTTTAAAAAACATTTACTAGAAATCTTTTGTAAAAGTCTTTACTGTCAATTTCGATCAATTCAATGCATCCTTGCTGAATGAACTTCTAATTTCTTTCTAAAAAAAAAAATCTTACTGGCCCCAAACTTTTAAACTGTACTGTATCTAACCGTTTTAACATACCTTACCTTAACATTCACCTGAGTGTAAAATAAGCCATCTTCAGGTTCACCAAAGGACTGAATATTATACGGCTCACCAGAGGGGCAGGAAGTTTGTGGACAGCCATCATCCTGTGTGGCCTATACTGGCTTTGAGGAGACAGTACAAGTGATTCACAAGGCAGCACATCAGTCGCGCATACAGCAGAGAGCTGGCCAGAGCGAAGTGCCTCATTCTCCTGGTCGTTATCATGAAAGACACAGACCCTTCTCGTATTCCTCAGCCCAGCGTTCCTGGCAACTGTTGCTTTAGAAATGTCCCAAGGTTCCATCCTGCCCTGAATCTCAGCCTGTGGAACAGAGAATGTTGAGACAATGATGCCATAAGGGAAATAACGGAACCTTGAAGAGCAGCCGACCACAAGTATCTTCAATTGCAGTGGAATCAGGTCACGCTTACTCTTCCTGCACACCTACACAATTTTAATGCAACCACTGAAGCGCTTGCCAGTAGGGATGAGTGAATTGAGAGGGTTGGTTGTTAGTTAAGTGTTAGTGAGATGTTATGGCAGCACTGAGAGTTCAAAGATGGCTCAGTCCTGGACGATCAGTGAAGGTTACGGTCAACGATGCTCCCAGGCTCTGACAGAACTGCTGAAACAGCCAGGCGAGGCCGGGGGCGTGGACAGAGGAGGAGGCCACCACCCAATCGGATCCAATGGCATCTCTGGCAGGTCAATGCGCACCAACAACGGTGGTCAGGAAGGACGGATGGACGGAAATGAGAGAAGGAGAAATGCAGTGATGAAGATGGAGTGGGATAATGAACTGCTAGAAAAGTATTTCTCAGATAGATCCATGAAGGTATCCAAGATTTGCTGCTAAAAAATAGACCTAA

Function

NR:

description
hypothetical protein cypCar_00011291

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_00821815_00825192.mRNA True 1530 mRNA 0.39 3 820595 825205

Neighbor

gene id symbol gene type direction distance location
CI01000034_00785411_00801907 NA coding upstream 18536 784545 ~ 803844 (+)
CI01000034_00735558_00738466 DESI1A, DESI1 coding upstream 81120 735487 ~ 739475 (+)
CI01000034_00683973_00725610 EP300, EP300B coding upstream 94690 683973 ~ 725905 (+)
CI01000034_00661553_00677752 XPP3, XPNPEP3 coding upstream 142118 661553 ~ 679148 (+)
CI01000034_00643011_00645310 RBX1 coding upstream 175285 642901 ~ 645310 (+)
CI01000034_00860887_00862727 NA coding downstream 35682 860887 ~ 862901 (+)
CI01000034_00943362_00945523 NA coding downstream 118157 943362 ~ 945631 (+)
CI01000034_00951238_00955839 NA coding downstream 125262 950467 ~ 956087 (+)
CI01000034_01124686_01125224 NA coding downstream 299481 1124686 ~ 1126197 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 314520 1139725 ~ 1146324 (+)
G169254 NA non-coding upstream 3965 804693 ~ 816630 (+)
G169250 NA non-coding upstream 49479 770743 ~ 771116 (+)
G169245 NA non-coding upstream 56479 763886 ~ 764116 (+)
G169203 NA non-coding upstream 86502 733755 ~ 734093 (+)
G169210 NA non-coding downstream 46797 872002 ~ 872400 (+)
G169259 NA non-coding downstream 49572 874777 ~ 875411 (+)
G169260 NA non-coding downstream 51605 876810 ~ 877053 (+)
G169262 NA non-coding downstream 68414 893619 ~ 910887 (+)
G169275 NA non-coding downstream 86796 912001 ~ 912287 (+)
G169309 NA other downstream 144056 969261 ~ 969921 (+)
G169357 NA other downstream 278335 1053543 ~ 1119019 (+)
G169394 NA other downstream 325092 1150297 ~ 1193560 (+)
G169340 NA other downstream 425014 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 901305 1729413 ~ 1731179 (+)

Expression


Co-expression Network