CI01000034_00860887_00862727


Basic Information

Item Value
gene id CI01000034_00860887_00862727
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 860887 ~ 862901 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_00860887_00862727.mRNA
ACACTACAGCAAGGGATTACTACCCCAAGAGCTACCCTATGATGGATTACACACACCGCCAATCCTCGCCTGCAACCTTCCAGCCCATTGCTTTCCACCTAAAAGATAAACCCTTCCTTCCGCCTCCAGACATACATACTCCTTTGGCCATCACCATTACATCGGCCCAAGTTCCCAAGCCCAAGATCTCCAAGACCAATACACACCCACTCACCTCGACCTCGGCCTTCAAAGTCTGGGACCCCAACAAGAGTCATGTCCAACATCAGGTCCCTCTTATGGCACAGTCACAGCCACCACTGTCCCAACCTAACTGTCGGCGCCAGGCCTTCACCAACAAGCGGCAGTTTAGCATTGAGACTCTTCCAGAGTTGTTCACCCAGCCTCTGGGGTACGGACAGTCTCCACACCTTCACCCGAAACACAAGGGACTGCCCACGAACAGCAAAACGGAAATGTCTCTTGTGGCCCTGACCCATGTGTACGATAGCAAAAGGCAGGAGCCCTGCACCTCAGGAGCTTCACACCCTTTCAGACAAGGCCATTGTGCTGTCAACTTCTATCAGCCAAGAGCTGCCACACACTGTTCCCAGCCAGGCGTTTGGCTGCCACACTGCCACAGAACAGCAGGGGGCGCTGTAATTGATGACGGCCTGCTTCTAATACAGCAGATCCAAAAATATGTTCTCCAACGCTTTCTGTAGACTTGTTCTTTTCTTGTCTGTTTTGTCTTTTTCATCCACAAAGGATCTGAATGGAGATTTAGCGTTCTTGCTCGAAGACAAATGCAAGGCGACAAAACAAAATTTAATTATGCACCAATTTAAAGGAGACCTGCAGAAATGTCTGATGGCGACCTCTTGCTTCTTTACATGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_00860887_00862727.mRNA True 878 mRNA 0.50 3 860887 862901

Neighbor

gene id symbol gene type direction distance location
CI01000034_00821815_00825192 NA coding upstream 35682 820595 ~ 825205 (+)
CI01000034_00785411_00801907 NA coding upstream 58828 784545 ~ 803844 (+)
CI01000034_00735558_00738466 DESI1A, DESI1 coding upstream 121412 735487 ~ 739475 (+)
CI01000034_00683973_00725610 EP300, EP300B coding upstream 134982 683973 ~ 725905 (+)
CI01000034_00661553_00677752 XPP3, XPNPEP3 coding upstream 182410 661553 ~ 679148 (+)
CI01000034_00943362_00945523 NA coding downstream 80461 943362 ~ 945631 (+)
CI01000034_00951238_00955839 NA coding downstream 87566 950467 ~ 956087 (+)
CI01000034_01124686_01125224 NA coding downstream 261785 1124686 ~ 1126197 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 276824 1139725 ~ 1146324 (+)
CI01000034_01210160_01223724 NA coding downstream 347259 1210160 ~ 1223869 (+)
G169254 NA non-coding upstream 44257 804693 ~ 816630 (+)
G169250 NA non-coding upstream 89771 770743 ~ 771116 (+)
G169245 NA non-coding upstream 96771 763886 ~ 764116 (+)
G169203 NA non-coding upstream 126794 733755 ~ 734093 (+)
G169210 NA non-coding downstream 9101 872002 ~ 872400 (+)
G169259 NA non-coding downstream 11876 874777 ~ 875411 (+)
G169260 NA non-coding downstream 13909 876810 ~ 877053 (+)
G169262 NA non-coding downstream 30718 893619 ~ 910887 (+)
G169275 NA non-coding downstream 49100 912001 ~ 912287 (+)
CI01000034_00643011_00645310 RBX1 other upstream 214477 642901 ~ 645310 (+)
G169309 NA other downstream 106360 969261 ~ 969921 (+)
G169357 NA other downstream 240639 1053543 ~ 1119019 (+)
G169394 NA other downstream 287396 1150297 ~ 1193560 (+)
G169340 NA other downstream 387318 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 863609 1729413 ~ 1731179 (+)

Expression


Co-expression Network