CI01000034_00951238_00955839


Basic Information

Item Value
gene id CI01000034_00951238_00955839
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 950467 ~ 956087 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_00951238_00955839.mRNA
GTATAAAAACCTCCAAATACTCTAGGACTGTTTTGCATTCAACTTGTTGTGTGAATATTTAAAAACTGCACAAGTCATCTTAAATTTAAATTTTAACCCCACTTTTACCCAAGCAGGAAAATATTTTTGAACAATATTTATAGTTTATATCAAAAGAGAAACTATTAAAGGCAGTAGATGAGCAAATTATATCTCTTGGCTGCTTTCACAATATTTTTTAATTCACTTGACAATTACTTCATTTATGTATTTTTTTTGTAATTTAAACTAAAAACAGGTCATCAAAGCTTCATTCCTGATTAAAAAAACCTCATTCCAATCACGTCAGCTCAGCATACCTTAGAAATGTGTCAGATAGCAAACGGAGGAGTCTGGATGAAATCCTTCAGTACAACTCCGTACGATCAGCCCTCCCATGCTTGAAACTACTGAAAATTGTTTGCGTATCTGAAAGATGTTTAGCTCATTTTCTTATCATAAATGCATGTTAGAGGACAGATAGAAGACTTCTCATTGGGTTTGTGCAACCCTTAAAGACACTGGTCAAACAGGATTCCCAGTCATTCATAGTGGCGAAGGAACTCAGATTCAAGCACTTTACACTTTCTGCGGATCCAGAATCATAAACATCTGCTCTGAACATTGTGAGTATTTTCTTGAATATATCTTTTAAATATATATGCTAGAAAGAAATAAAGAGACTAAACTGTTGAAATAAAATATTGAGGGCAGATATTTCATTCATTAAGTAATTTTCTATTAAACAGAGCGATGACTTCAGATGAGAAGTTGTGGGACAGTCTGAAGGCTGAAATAGAGAAAGAAACCTTTGAACTAGAATCATCGCTGAGCTCTGAGATTGATGAACTATACGAAAATTGCTTGAGTCTAAAGAAGCAGACAATGGTCAACAAAATCCAAGAGAACAAAAACAAGATAAAGAATCAAACACATCAGATCAGAATACCAAGAATGCTCAGAACTGAAACTAAAGAAGGATTTGCAAAGTCATATGTGCTCTTCCAAACGGCAGAGGCAGAGGAATTGCGCATCATGTTACTGGGGGCAAGGGGGTCTGGAAAAAGCTCAACTGGAAACACCATCCTCAGGTGGAACGCCTTCAACACGGACATGCAACTGAGCAGAGTCACGCAGTTCTGTGAAAGAGCATCTGGAAACATCAATGGCCGGCCCGTGGCCATAATCGACACGCCGGGACTGAATAAGATCAGTCGAATAGAGAAGGAGGTGGTCAGGGAGATCATGAAATCTGTCACGCTCTATAAACCAGGACCACATGTGTTTCTGCTGGTTCTGCCAGTGGGAAATTTAACCAAAGAGGACAAGAACATGCATAAGCTGATCCAGGACATGTTCGGAAAGAATGTTTGGAATTACACAGTTGTTCTGTTGACGCATGGAGATCGACTAGAAGGGAAGATGCCGAATGACGTTATTGCCAGCTCAGATAAAGACCTTAGAGACTTTATTCGCACTTGCAGTGGTGGATTTGTATTCTTCAATAACAAGAACACAGGAAACTTTGAGCAAGTGACCAAACTTCTGGAGAAGATTGATACTTTGGTGGCCATCAATGGCAGAGGCTGCTACACAAATTCGTTTTACCCGACTTCAGAGAGAAAGATACGTGAAAAACAAGAGAAGATACTGGAGGAGAGACAGGAGGAGATAGCACGAAAAGAGAGAGAGCTGGAGGAGAATTATGAAGATGAGGAGGAGTTAGAGAAGAAAAAGCGTGAGCTCTGGAGAGAAGAAGAGGAAGATGCACGGAAACTAGCTGAGAATCCACAAAGACGCAAAAGTCTGACAGTGAAACTCACCAGATCCCCCACATCTGTAACAAAATCACAGACCATTCATTACGTCAATTGATCTAACTGTACAGGAACTTTCTGAAGATTAATGGAGATAATGTAATATTGTCTGTATTGATCATCTATAATCTGCATTATTCAGGTTTTAAATTGTTGCTGCATATTGTTGTTGTGTTGTTTTATTTAGGTACCTCATTAACTGTGTATGTAATAGCAATTCATTCACACTGAATAACCTCTTCTTCCACATGTAAAAAAAAATAAGAATCTAAAAAAAAAAACGTTTACGTTTCCATACATGTTTAA

Function

NR:

description
GTPase, IMAP family member 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_00951238_00955839.mRNA True 2141 mRNA 0.38 4 950467 956087

Neighbor

gene id symbol gene type direction distance location
CI01000034_00943362_00945523 NA coding upstream 4836 943362 ~ 945631 (+)
CI01000034_00860887_00862727 NA coding upstream 87566 860887 ~ 862901 (+)
CI01000034_00821815_00825192 NA coding upstream 125262 820595 ~ 825205 (+)
CI01000034_00785411_00801907 NA coding upstream 148408 784545 ~ 803844 (+)
CI01000034_00735558_00738466 DESI1A, DESI1 coding upstream 210992 735487 ~ 739475 (+)
CI01000034_01124686_01125224 NA coding downstream 168599 1124686 ~ 1126197 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 183638 1139725 ~ 1146324 (+)
CI01000034_01210160_01223724 NA coding downstream 254073 1210160 ~ 1223869 (+)
CI01000034_01305634_01306636 NA coding downstream 349547 1305634 ~ 1306844 (+)
CI01000034_01383935_01395565 NA coding downstream 427504 1383591 ~ 1396448 (+)
G169275 NA non-coding upstream 38180 912001 ~ 912287 (+)
G169262 NA non-coding upstream 39580 893619 ~ 910887 (+)
G169260 NA non-coding upstream 73414 876810 ~ 877053 (+)
G169259 NA non-coding upstream 75056 874777 ~ 875411 (+)
G169210 NA non-coding upstream 78067 872002 ~ 872400 (+)
G169308 NA non-coding downstream 9766 965853 ~ 966104 (+)
G169312 NA non-coding downstream 23424 979511 ~ 982209 (+)
G169302 NA non-coding downstream 37073 993160 ~ 1021824 (+)
G169357 NA non-coding downstream 97456 1053543 ~ 1119019 (+)
G169300 NA non-coding downstream 106168 1062255 ~ 1062988 (+)
CI01000034_00643011_00645310 RBX1 other upstream 304057 642901 ~ 645310 (+)
G169309 NA other downstream 13174 969261 ~ 969921 (+)
G169394 NA other downstream 194210 1150297 ~ 1193560 (+)
G169340 NA other downstream 294132 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 770423 1729413 ~ 1731179 (+)

Expression


Co-expression Network