CI01000034_01648924_01649935


Basic Information

Item Value
gene id CI01000034_01648924_01649935
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1648898 ~ 1650403 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_01648924_01649935.mRNA
ACATACACCCATTTTGTGATTTAGACTTGAATCTTACTTCCAAAGTGAGATGTATTTTTAAATGTGTCTCTCTTCAAAAGGTACTCTAGAATTTAAATGGATGCATTTGCGTGTGGCATCTGTATAGACCTTGGAATGCTATTGTTGTCACACATATTTTATTTATTTATTTTTTTTTTAGGAAAAAAAAAAAAACCTTTCTGCCACATTGGTTTGAATAGGAGTGAACAGATTTCTTTTGAGGGCCTCAAAAGTTCACCGCTATTATTTGCAGACAGAAGCCTAAAGAAAAATGTGAGAATTATACAGAAAAATCATTAATCACCGCTTCTCTTTAAACAAGTCTTCTTTCCTATTGTCATTCGGCAGCACAACTGCTCGGACCTTCTGCTAGGAGGGGAGTGAAATCTTGAAGGGCACTTGAAGACATCCCCCCTCCCTTCTCTACCATCTTCTATTCACCAAGTCATGCCACAAGAAAACTTTTTTGGCGAGGGATGTCCCATGAAGAATCTCTTGAAAATGTTAGCGCGAGTGAGAATCTTCGCAGGGCGAGAGATGGCAGCGTTCAAGATGAGCACGAATGCTCTGATACGGGCTCACCGCCATTTAACCCCTGCAAATCAATCTCTTGTGCGTATTGGAGAAAAGGCCAGTGGTTCTGGTTTACGGCTTTCGCCTCCCTCTGCGGACCTGTGTGGCATGAAGCGTGGCAAAAAAAGACAAAAATATAGAAACCGATATTGAGGGAAGTTGAGGGATGACAGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_01648924_01649935.mRNA True 773 mRNA 0.41 2 1648898 1650403

Neighbor

gene id symbol gene type direction distance location
CI01000034_01625293_01629938 HOXB3AA, HOXB3A, HOXB3 coding downstream 17526 1624700 ~ 1631372 (-)
CI01000034_01621979_01623991 HOXB2, HOXB2A coding downstream 24829 1621789 ~ 1624069 (-)
CI01000034_01603228_01604932 HOXB1A coding downstream 43468 1602434 ~ 1605430 (-)
CI01000034_01498024_01498299 NA coding downstream 149062 1497080 ~ 1499836 (-)
CI01000034_01398718_01404884 CBX1A coding downstream 244014 1398718 ~ 1404884 (-)
CI01000034_01652735_01654473 HOXB4, HOXB4A, HOXB4AB, HOXB4AA coding upstream 1874 1652277 ~ 1655606 (-)
CI01000034_01666303_01667765 HOXB5A, HOXB5AA, HOXB5 coding upstream 15661 1666064 ~ 1667900 (-)
CI01000034_01670204_01671915 HOXB6AA, HOXB6A, HOXB6AB, HOXB6 coding upstream 19500 1669903 ~ 1671935 (-)
CI01000034_01675050_01677339 NA coding upstream 24390 1674793 ~ 1678699 (-)
CI01000034_01680053_01683539 HOXB7A coding upstream 29186 1679589 ~ 1683539 (-)
G171631 NA non-coding downstream 246986 1400324 ~ 1401912 (-)
G171582 NA non-coding downstream 400545 1248143 ~ 1248353 (-)
G171572 NA non-coding downstream 450628 1197978 ~ 1198270 (-)
G171405 NA non-coding downstream 521255 1126485 ~ 1127643 (-)
G171549 NA non-coding downstream 526179 1122417 ~ 1122719 (-)
G171704 NA non-coding upstream 60275 1710678 ~ 1710957 (-)
G171712 NA non-coding upstream 90241 1740644 ~ 1741140 (-)
G171724 NA non-coding upstream 114098 1764501 ~ 1768078 (-)
G171731 NA non-coding upstream 130443 1780846 ~ 1781056 (-)
G171751 NA non-coding upstream 177193 1827596 ~ 1830627 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 330644 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 571676 1062444 ~ 1083413 (-)
CI01000034_00571856_00577732 NA other downstream 1064615 571856 ~ 577775 (-)
G171229 NA other downstream 1381652 229404 ~ 267246 (-)
G171755 NA other upstream 213715 1864118 ~ 1866373 (-)
G171835 NA other upstream 791418 2441821 ~ 2446293 (-)
CI01000034_02510595_02511512 NA other upstream 859410 2510061 ~ 2511521 (-)
G172016 NA other upstream 1584560 3234963 ~ 3236615 (-)
G172151 NA other upstream 1741110 3391144 ~ 3451802 (-)

Expression


Co-expression Network