CI01000034_02154099_02162106 (NAGS)


Basic Information

Item Value
gene id CI01000034_02154099_02162106
gene name NAGS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2152595 ~ 2162106 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02154099_02162106.mRNA
ATGGCCAAAGTCAACAGCGGTTCGTCCGGTTGCAGGGCCATGGCCATGGCTGGCCAGTTTTGGACGAAACCGTCAGCCCTGAGTCAGCAGAGGAGCGCTCATCATCAGCGGAGACTAGTCACAGTGAATCAGCGCATGAGATCAGCCAGTGCTGCGGGACAGTGGAGCAAAACCCCAGCGTGGACCCAGCAGGAGCTCCTCAACAACACCACCCCGAGTGAGCTCAACGTCTGGTCTAACCGCACTCTGATCTACAGAGATGTCAAGGCTTTTCTTAATCAAATTGGAGGTGATCCACGGGAGGCTCGGTACTGGCTAACACACTTTCAGCGGGCTGGTTTATCTCCAGCGTTTGCGGTCCTGGAGGTTGACACATCAGTGTTTGATAGCCGTGAGATGGTTCAGAGCCTGGCCTTTGGGCTCTCATTCCTGCAGCGGATGGATATGAAGGTTGTGGTGGTGATGGGATTGCCTCCTGAGATGGAGGAAGAGGACAGCACCAAAACTGGGACTAATTCCTCCCTTGCCAGGACTGTGATGGTGAAACATTGCCAGGCTTTAACAGAAGCACTTCAGCACAACTCAGCCAATGTGATGCCCTTCTTTAGTTCAGAGGCCCTTTTACAACTGCAGGACCCTCAGGATAAGAGCAGCAGTGGTCCCACAGTTGTTGTGGACTCAGCTCTTCTGCAGTGGACTCTGGACTGTAGAGTCATTCCGCTGGTCTGTCCAGTGGGCCGCGATGAAGGTGGCCGTTCTTCTGTTCTCAGCCCGATCCAGGTGACGGCAGCCATCTCGCAATCACTGCAGCCCCTGAAAGTCATATTCCTGAACAGCTCAGGGGGGCTCCGTAACCAAAACCACAAGGTGTTGGGTTTAGTGTCATTGCCTGGAGATTTGCCAGGCCTGAGTTCTGTGAAATGGCTGAGTGACATGGAGAAAAAGCGCATCAGTACCATTGCACAGCTGCTCAACCTGCTGCCGGTAGAGAGCTCGGCTGTACTCACCTCAGCAGGAACGCTCCTTACAGAACTCTTCAGCCATAAAGGCGCAGGTACCCTGTTTAAAAATGGAGATCCCATCCACAGATACAGCAGCCTAAATGACATTGATGTTGGCCGTCTCTTGGCACTGATTAACAAGTCTTTTGAGAGGAACCTGAGAGAGGATTACATAGCATCTCTCAAGGGCAGACTGCATTCTATTTACCTGTCTGAAGGGTACAGTGCGGCTGCTATAATCACAACAGAGCCTGTGAACAGCGGCACTCCATACCTGGACAAATTTGTGGTCAGCAGCAGTAAACAAGGGCAAGGAACTGGCCAGATCTTGTGGGAGTGTATTCGTCAGGACTTGGGCAAGCTCTTTTGGAGATCCCGTGCTACTAACCGTATCAATCCCTGGTATTTCAAGCACTGTGATGGCAGTTTTGTAAATGGTCACTGGATTGTATTCTGGCTTGGCCTTTCAGACATCCGTGAGTCTTATGAGCTGGTGGAGTATGCCAAGTGCCTTCCTGACTCCTTCGGCTCTCAAACCATAACAGAAGCAGAACCCCTTCAGCAACCCCAAGGGTCTTAAAATCATACTCATCTCATGCCCTGTGAGGTCACTGCATCATATTTTCACACTGTCTTCGAGTATTGGCTGAGTAAAGGAACAATTCAAACCCATATTTTGACTTCCTTTCTTGAACACAAAAGGAGTTTTGCGTCATCTGCCCCTGGCCCCCAGCCACTTTCTTTAAAAAAAGGGGTTTTTGTAACAATGCCGTATAGAACAGTGGATCTCAACCTTTCGACTCCATGGTCCTCCATTGTCCTTAACAATATTCAAAAGCCTCCTAGCCCTAGTTCTGTTTTCAAAACTTATTTTAATTTAGTTTTTATAATTAAAATAATTACATTTCAGGGTTCCAGAGGTTTTAAAAGCTGAGTGTTCCCAAGCTTTTTACCCAGTGACTCTTCCAGTAGATCATGATTTACTGGAGAAGAATTAAAGATAAAGATTTTTTTTTTTAAATATTTTTTACTTTCAATTTCTACCCAATAAAATATTTCAGAGCTTTGCATAAATAGTAAAATGTTTATTCATTATAAAATTGTCCATGGAGTTTTAAAATTGTATTAATTTATGTGATTCTTCCAGGTCTATAAATCACTATTTTAAAATCAGGCAACAGTTTCTAAGGGAAAAAAATGAAGTAATGTTTAGATTTAGTTGTTTTAGCTTATTTTAATGCTTTTTTTTTTTTTGTCGTTTTAATTCATTTTATTCATCTTGAGACCCCTTCTGAATTTGTGGGCCCCTGCCTCCTGGTTGAGAACCACTGCCATAGAAGAACCATTTTTTGTGCCATAGAAGAACCTTTCCATGAACATTTCTTAATAAAAGAACATTTTTTCTTCTTACTGTGAAGAACAGTATACAAATCTGAAGAACCTTTTTCATGGGATCATGGATGCCAATAAAGAGCCTTTATTTTTAAGAGTGTATGGGGGGAAAAATGCAGCTTGAGCATTTTACTAAATCATCTTTTGTGTTCTACTCAAGAAAGGTGTCAACATGAGGAGATGAGTAGGCTAAATGACTTTATTTAGCCTATCCTAAGATTGGTCCTCTCGTTTCAAGCACTTTTGCTTTCATAAATCACAATTCTGATGTCACAGTTGGGATTTCAGTGCTACAATGTAATGTTTATTCAGGTTCAATATAAAGGTAAATTCACACCTCACAGACAAATGCCAACAAACAAGTTGGCAGTGATTTAGAATTTTATTAAAAGATAACTTTCATGCCCCAACAAACACTGATTAAACATGGTCAGTCAGGTGAAAACAGACTCCAACAGAGGTAACACACTGATCAGACAAAACCCAACAAATGTGTTTTTTTTTGTATTTGACTGCGCGGTGTGAATTGACCTTAACAGGACAATGAAATTTTTCGGATTTATGTAATGAAGAGACAAAATGTGAGTCTACAGTGACAACTGCGCAATGCGAGAGTTACAAAAGGGTGAAGCTGTGGTATTTGCATCCCAAACCTGTATTTCTGCTGTGGCCTGCTGAGTCATTAGAATAAA

Function

symbol description
nags Enables acetyl-CoA:L-glutamate N-acetyltransferase activity and arginine binding activity. Predicted to be involved in arginine biosynthetic process. Predicted to act upstream of or within urea cycle. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial matrix. Human ortholog(s) of this gene implicated in N-acetylglutamate synthase deficiency and amino acid metabolic disorder. Orthologous to human NAGS (N-acetylglutamate synthase).

GO:

id name namespace
GO:0034618 arginine binding molecular_function

KEGG:

id description
K11067 NAGS; N-acetylglutamate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02154099_02162106.mRNA True 3085 mRNA 0.44 8 2152595 2162106

Neighbor

gene id symbol gene type direction distance location
CI01000034_02110958_02136112 NA coding downstream 16483 2110946 ~ 2136112 (-)
CI01000034_02098976_02103261 NA coding downstream 49334 2097603 ~ 2103261 (-)
CI01000034_02092229_02092596 GNGT2, GNGT2A coding downstream 59953 2091959 ~ 2092642 (-)
CI01000034_02010544_02026521 NA coding downstream 125870 2010142 ~ 2026725 (-)
CI01000034_01957876_01995623 NA coding downstream 156779 1957876 ~ 1995816 (-)
CI01000034_02166509_02170478 NA coding upstream 3895 2166001 ~ 2170478 (-)
CI01000034_02171666_02177554 LSM12A, LSM12 coding upstream 9498 2171604 ~ 2178398 (-)
CI01000034_02182977_02213069 HDAC5 coding upstream 20858 2182964 ~ 2213069 (-)
CI01000034_02295276_02337198 TANC2A, TANC2 coding upstream 133170 2295276 ~ 2337198 (-)
CI01000034_02459679_02504620 WNK4B coding upstream 297573 2459679 ~ 2505022 (-)
G171867 NA non-coding downstream 56287 2095850 ~ 2096308 (-)
G171860 NA non-coding downstream 77689 2074696 ~ 2074906 (-)
G171815 NA non-coding downstream 190946 1959454 ~ 1961649 (-)
G171745 NA non-coding downstream 199231 1952910 ~ 1953364 (-)
G171748 NA non-coding downstream 199817 1952458 ~ 1952778 (-)
G171849 NA non-coding upstream 1161 2163267 ~ 2165434 (-)
G171841 NA non-coding upstream 240987 2403093 ~ 2428544 (-)
G171890 NA non-coding upstream 381057 2543163 ~ 2543769 (-)
G171907 NA non-coding upstream 427438 2589544 ~ 2589761 (-)
G171937 NA non-coding upstream 508050 2670156 ~ 2670385 (-)
G171755 NA other downstream 286222 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 834341 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 1075373 1062444 ~ 1083413 (-)
CI01000034_00571856_00577732 NA other downstream 1568312 571856 ~ 577775 (-)
G171229 NA other downstream 1885349 229404 ~ 267246 (-)
G171835 NA other upstream 279715 2441821 ~ 2446293 (-)
CI01000034_02510595_02511512 NA other upstream 347707 2510061 ~ 2511521 (-)
G172016 NA other upstream 1072857 3234963 ~ 3236615 (-)
G172151 NA other upstream 1229407 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 2004393 4165373 ~ 4172272 (-)

Expression


Co-expression Network