CI01000034_02166509_02170478


Basic Information

Item Value
gene id CI01000034_02166509_02170478
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2166001 ~ 2170478 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02166509_02170478.mRNA
GAATATTTGTAACCACCTTTTTGGGAAAAGGAAATGTTAAAGTGATATCTTGCCATGTTAAGAGACTGGGACAGGGGGCGATGCTTTTACTCTTTCTGTCTCCGTCGAGGAGCTCAAGACTGTGTAGTCACCTCTGCCAGTGCTATGAACACTCAGACCTGGTGGACTGCCATGCCAGGGGGTTTGAGGATATCCCACATGGACTTCCCCACGGCACCTGGCTCCTAGACCTGGGAGGAAACAAGCTTACGGAGATCCGGAGTCGAGCTTTCGCTGGCCTTTGGTCTTTGCGTATTCTAGTGCTCTCGGACAGCAGCATCAAGTTTCTTCATACGCAGGCTTTTTTCTCTCTGTCCTTTCTGGAGAAGCTAGACATGAGTCGTAACAACCTCACTCAAATCCCTCCTAATTTCTCGGAGAACCTGTCTTCTCTGCGTGAGTTGCGGCTGGACCACAATGCACTGGTGCTTTTGAAACCTCCAGGCCTAGAACATCTGGAGAACCTTGAGAAGCTGGACCTCAGGCACAATCGTATCCAATCTGTTGAACCCGGCGCGTTCCGTGGCCTGTCCCGCCTGCGCCACCTTTACCTCCAAGGAAACCACCTGGGTGTTGTGAGAGACGGATCTCTCACCATGCTGCCCGGACTGGAAGTTCTGCTCCTGGGGAACAACAACATCTCTCGCATCGAGGTTAATGCACTAGCACCATTACACAGTCTTTCTCTTTTGGGCTTGGAGGGGAATCATCTGGAACACCTGAACTTTAAGACATTCCTGAGCTTGCACACAGCTGCTACACACTTGCAGTTGGCTGGGAACCCGTGGAACTGTGACTGCGACCTGCACCGTGTCTTCACCAAGCTGCTTAGTGTGCGGCACCTCCTTGTGGACGACTATCACAACGTAACTTGTCGGGAGCCCTGGCAGCTTGCTGGAGCCTCTTTGGCTTGGGTGGACAGCCAGTTGTGTGTGGCTGAGACCGTTACTGTGTTAGTCATCACTGCTACTGTGATTGTGACTGTCTTTGGTGCCTTGGTCATGGCAGAGAGAAAACGCAAGAGAAAATACTGGGAACACAATGAGGGAGAAGCGCAAGAGTAGTAAGGTGATTATACACTGTAAGCCCGAATAAGTTGCAAAACTCAGTTAAGAAATTCAAGGTTTAAGTAAGCAGAACTGGCAGATTTTTATTTTATAAATTTGAATTGTTCTAACTTGTAATGTTTGAGTACACTAATTCATACATTTAACTTAAAATTATCATGTAATATGTAAGAAATAAGTTCATAAAACTCAAAACAATTAAACGGTTCAGTGTACTTAAAATGTATCAGTTCTGTGAACTTGGAAGAAAAAGAAAGTGCTAAATACTCATTAAAGTTAATTTGACTGAACTAAATTGTTTAATTTAAGTTTGTCCTACTCAAACCAATAATTTTTTTAAGCATTAGGGTTTACAGTGTACAGAAGGTTAGGACACTTTTCTTTTTATTTAAACCTTGAAAATACAGATACAGAGGTCCAGCTTTGGCCTCTTTTCCTACACTAATTAAAGCGAGAAACTGGACTGATACCATCAGTTCTCAGTTGATGTGGTGATGGAAATAAA

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02166509_02170478.mRNA True 1611 mRNA 0.45 3 2166001 2170478

Neighbor

gene id symbol gene type direction distance location
CI01000034_02154099_02162106 NAGS coding downstream 3895 2152595 ~ 2162106 (-)
CI01000034_02110958_02136112 NA coding downstream 29889 2110946 ~ 2136112 (-)
CI01000034_02098976_02103261 NA coding downstream 62740 2097603 ~ 2103261 (-)
CI01000034_02092229_02092596 GNGT2, GNGT2A coding downstream 73359 2091959 ~ 2092642 (-)
CI01000034_02010544_02026521 NA coding downstream 139276 2010142 ~ 2026725 (-)
CI01000034_02171666_02177554 LSM12A, LSM12 coding upstream 1126 2171604 ~ 2178398 (-)
CI01000034_02182977_02213069 HDAC5 coding upstream 12486 2182964 ~ 2213069 (-)
CI01000034_02295276_02337198 TANC2A, TANC2 coding upstream 124798 2295276 ~ 2337198 (-)
CI01000034_02459679_02504620 WNK4B coding upstream 289201 2459679 ~ 2505022 (-)
CI01000034_02510595_02511512 NA coding upstream 339856 2510061 ~ 2511521 (-)
G171849 NA non-coding downstream 567 2163267 ~ 2165434 (-)
G171867 NA non-coding downstream 69693 2095850 ~ 2096308 (-)
G171860 NA non-coding downstream 91095 2074696 ~ 2074906 (-)
G171815 NA non-coding downstream 204352 1959454 ~ 1961649 (-)
G171745 NA non-coding downstream 212637 1952910 ~ 1953364 (-)
G171841 NA non-coding upstream 232615 2403093 ~ 2428544 (-)
G171890 NA non-coding upstream 372685 2543163 ~ 2543769 (-)
G171907 NA non-coding upstream 419066 2589544 ~ 2589761 (-)
G171937 NA non-coding upstream 499678 2670156 ~ 2670385 (-)
G171939 NA non-coding upstream 500377 2670855 ~ 2671069 (-)
G171755 NA other downstream 299628 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 847747 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 1088779 1062444 ~ 1083413 (-)
CI01000034_00571856_00577732 NA other downstream 1581718 571856 ~ 577775 (-)
G171229 NA other downstream 1898755 229404 ~ 267246 (-)
G171835 NA other upstream 271343 2441821 ~ 2446293 (-)
G172016 NA other upstream 1064485 3234963 ~ 3236615 (-)
G172151 NA other upstream 1221035 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 1996021 4165373 ~ 4172272 (-)

Expression


Co-expression Network