CI01000034_02231423_02231755


Basic Information

Item Value
gene id CI01000034_02231423_02231755
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2231303 ~ 2232124 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02231423_02231755.mRNA
GTTTAAAAAAAAAAAAGCAAACAAATCAAAAATGCAAGCAGAACTGGTTTCCGTGGAAGGAAACGCCGTAGACAAATCCTTAAATTGTCCACTCAGAACCATCAGCTGTATGACATACAAATGAGTCTATTCATAAACCACATCACCTTCTTGTCTAATCGTCTATGTCAGAAACAAACTGCTAATTCACACCAACAAGTCCGGCTTGTATCCAAGTCCCCCCGTCTGAGCGTGCCTGTATCCTGCAATCATCTGAAGTTATGCATGTGGTATCGGCGGACTCCAAAAGAGAGACTTCCCCATGACGAAATGCGACGGAGCTTGGAAAGACGAGATGAAAGCGACAGAACAGGAGAGACTTTTGCATGCCAGTCCCTCTGTTCCTTCCTTCCCCTCGCCTCTCTGTACAGCCAGCCAGTCCTCGCTACAGAACAGTACAACTCGCTCTCCTGATGAATGGGCTTAAAGTGAACCGTCCGACGTTGTTCTGTTTAGTGTGACTGTGTTGCTTGCTTTATGTATTTGTTTTAAGCCGAATCTCTGCAGCTTCACCCGCTGTGCGTGGCGAACGGGAGAGCAGAGGTGTAGAGACGTGGAGTTTACAAACAGACTGGAGCTGCTTCAGGCTGCTGGAAATAGCTGCCGAGCGACAGGGGAGGGGCGGGACCGTGCTATAAATAGAGTCGGGAGCTGAGAGCTTGCTTGGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGGGGGTGAGAGAGATAGAGATGGAAGATGGAAGAGAGGGGATGGTCGATTGTTTTTCACGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02231423_02231755.mRNA True 822 mRNA 0.48 1 2231303 2232124

Neighbor

gene id symbol gene type direction distance location
CI01000034_01900645_01947187 RAPGEFL1 coding upstream 284116 1900645 ~ 1947187 (+)
CI01000034_01872601_01880795 CASC3 coding upstream 350508 1872601 ~ 1880795 (+)
CI01000034_01862099_01867869 NA coding upstream 363434 1862099 ~ 1867869 (+)
CI01000034_01858418_01860499 NA coding upstream 370218 1858418 ~ 1861085 (+)
CI01000034_01811735_01836960 IGF2BP1 coding upstream 394343 1811467 ~ 1836960 (+)
CI01000034_02256162_02260170 NA coding downstream 23641 2255765 ~ 2260464 (+)
CI01000034_02275470_02281951 CYB561 coding downstream 42477 2274601 ~ 2282604 (+)
CI01000034_02421189_02423360 NA coding downstream 188902 2421026 ~ 2423527 (+)
CI01000034_02550332_02552258 NA coding downstream 318208 2550332 ~ 2552839 (+)
CI01000034_02563086_02564052 NA coding downstream 330814 2562938 ~ 2564172 (+)
G169686 NA non-coding upstream 49158 2170179 ~ 2182145 (+)
G169692 NA non-coding upstream 64377 2166484 ~ 2166926 (+)
G169706 NA non-coding upstream 117971 2109522 ~ 2113332 (+)
G169698 NA non-coding upstream 136686 2091899 ~ 2094617 (+)
G169696 NA non-coding upstream 140655 2090405 ~ 2090648 (+)
G169760 NA non-coding downstream 2884 2235008 ~ 2304098 (+)
G169768 NA non-coding downstream 11710 2243834 ~ 2259804 (+)
G169906 NA non-coding downstream 244152 2476276 ~ 2477466 (+)
G169922 NA non-coding downstream 274521 2506645 ~ 2509031 (+)
G169921 NA non-coding downstream 277655 2509779 ~ 2510694 (+)
CI01000034_01729413_01730790 EVE1 other upstream 500126 1729413 ~ 1731179 (+)
G169340 NA other upstream 920425 1250219 ~ 1310878 (+)
G169394 NA other upstream 1037743 1150297 ~ 1193560 (+)
G169357 NA other upstream 1112284 1053543 ~ 1119019 (+)
G169309 NA other upstream 1261382 969261 ~ 969921 (+)
G169806 NA other downstream 85849 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1202012 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1892976 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1962514 4192311 ~ 4200636 (+)

Expression


Co-expression Network