CI01000034_02256162_02260170


Basic Information

Item Value
gene id CI01000034_02256162_02260170
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2255765 ~ 2260464 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02256162_02260170.mRNA
CTATAAATCCAAAGACAAATGACTATTCTTGTCTTGTTTTTTGGATTTTCATTCACTGCAGAGAGTGCATGAGGCACAGCTACATCACCGCTTTGATCACTACCATGTTCACAAGCTCATTACACAAACTCTTCCTGGAACTGGAAGTTACACCTTGATTACACAGTCACTAGATTACACATTGATTACATGCCACTTTACTGTTTTTGAGCCTGTAATGTCCAGAGCGATTTTAAAAAAAAAAAAATCACCAATCATCTGCACAAATTATGGAAGAGAAAGTGGATTTCCCAACACTGAAGCCCCCGAAAATATACCCCAACCATAAATGTTTAAACACAACAGTCTGCTAAAATCCTAAAAGGGAGCTGTTGGATGCCTCTGAGCGGACAGGATCATGAAAGAGGGTACAGGTCATCCACAGCGTAACCACGGCAACATCTGTTTTCAACGCATCAAAATATTTTCGGATTTTCACACTCCTACATTCCACACTCACCTCCTGGCCCAGAGGGGTTACGCTCATATTGTTAAGCAGCTGAAGGAGGCTGGTGTGGCTGTGGGTGTTGCAGAGGAGAACATCATCTTCTGCGCTATACTGGAGTTCAAACCGATCAACCTGATCAAAACGCTCAGATATTACACTGGGAGACTGATGGTCGTGAAAATATTAAACTCATCCCGTCAGGCGATTCCCACGGGCAAAGAAATGGCGATAGTTTGCAAGGAACTCGGACTAAATCAGACAAACTCTAATGTCAAAATGCAATACAAAATCCATCCGCTGTCAACACAATGTGTTTCCCTGCGGGTAGGACCTTTGCCTGTCGGAACTAAACTGGTTTTAGAGAGCAGGGCGCCCCCTTTTGGTAGGTTATGGAGAAGTGTTATGCGTGGGGAGAATGTGGTGGGCGAGCGAGGATGTTACAACACTTACACCGTTTCTTAAAGGTGCTGTATGCCAGGGGTTTTCAATGATCAAAAAATAGGCCTATTTTAATCAACGTTTTATTTATTTTATTCAGTCTGTTTATTTAATTAGTTTAATCTTATTTTTATTTTTTATTTTTATTTACATTTTTTTACAGTTTTTCTTTAGACCCCCTAACACTCCCTTGCGGCCCCCAGTTTGAAAACCCCTGCTTTATGTGATTGAACCCGTTTTGACTAACTTATGCCAGCCTAAGTCACTTAAAGGTTCTGTAATTTTTTGCTAATTAACGTTTTATACAATTTTGAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02256162_02260170.mRNA True 1243 mRNA 0.41 3 2255765 2260464

Neighbor

gene id symbol gene type direction distance location
CI01000034_02231423_02231755 NA coding upstream 23641 2231303 ~ 2232124 (+)
CI01000034_01900645_01947187 RAPGEFL1 coding upstream 308578 1900645 ~ 1947187 (+)
CI01000034_01872601_01880795 CASC3 coding upstream 374970 1872601 ~ 1880795 (+)
CI01000034_01862099_01867869 NA coding upstream 387896 1862099 ~ 1867869 (+)
CI01000034_01858418_01860499 NA coding upstream 394680 1858418 ~ 1861085 (+)
CI01000034_02275470_02281951 CYB561 coding downstream 14137 2274601 ~ 2282604 (+)
CI01000034_02421189_02423360 NA coding downstream 160562 2421026 ~ 2423527 (+)
CI01000034_02550332_02552258 NA coding downstream 289868 2550332 ~ 2552839 (+)
CI01000034_02563086_02564052 NA coding downstream 302474 2562938 ~ 2564172 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 401745 2662209 ~ 2665540 (+)
G169686 NA non-coding upstream 73620 2170179 ~ 2182145 (+)
G169692 NA non-coding upstream 88839 2166484 ~ 2166926 (+)
G169706 NA non-coding upstream 142433 2109522 ~ 2113332 (+)
G169698 NA non-coding upstream 161148 2091899 ~ 2094617 (+)
G169696 NA non-coding upstream 165117 2090405 ~ 2090648 (+)
G169906 NA non-coding downstream 215812 2476276 ~ 2477466 (+)
G169922 NA non-coding downstream 246181 2506645 ~ 2509031 (+)
G169921 NA non-coding downstream 249315 2509779 ~ 2510694 (+)
G169927 NA non-coding downstream 288170 2548634 ~ 2588029 (+)
G169946 NA non-coding downstream 328476 2588940 ~ 2589235 (+)
CI01000034_01729413_01730790 EVE1 other upstream 524588 1729413 ~ 1731179 (+)
G169340 NA other upstream 944887 1250219 ~ 1310878 (+)
G169394 NA other upstream 1062205 1150297 ~ 1193560 (+)
G169357 NA other upstream 1136746 1053543 ~ 1119019 (+)
G169309 NA other upstream 1285844 969261 ~ 969921 (+)
G169806 NA other downstream 57509 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1173672 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1864636 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1934174 4192311 ~ 4200636 (+)

Expression


Co-expression Network