CI01000034_02421189_02423360


Basic Information

Item Value
gene id CI01000034_02421189_02423360
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2421026 ~ 2423527 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02421189_02423360.mRNA
ATATTAAAATAACACCCTCAATTTCCACTACTTACAGAGATGGACATACACACACACACTAACTTCACACATTTTCACAGTTTGAGAGAGGTGAACGATGTTAAATTCAGTAGCCAGATAAGCAAAGACAAAAGAGTGACAACGTCTGCATCTTAATTGAAACATGTCCACACTTTCAAATGCAAAACAGAGCCTGTCATTTAACAGCCTCCCTCCAGCCCTCCAAGACAGGGCATTTACTGTGGCCTCAAGCAAAGGGGTCAAAGGTGATTGGACAGACATCTGCCACAACAATGACTCAGACTGTCTGACACAACAGACCAGTGCAGATTTACAGCACACATGTTTGAAAAGACTCCACTTCTCCTTTCTGCTCTGCTTGCTTAACTTCTGGTTTCAATGGATGATTGTGGAGCTGTGCTGCTGGATATGGAGCGTAAGATATAACAGACTTCACACTGAACAAAGCTTCATTGGGTGGTTGGTTTCATCCAGCGAAAGCTTGTCAGATCAGAGATGGATCCTGCAGTTAACCTGCAGCTGCTGCAGCACACGCCACTGGCATAACGTGCTAGAAGCTTGCAAGGGCGTATTCAACCTAAAACCACAGCGAGGAGGAGATGGTGTGTGCAACACAAGGAAAAGAAATGAAGTCAAAGAGCCATCATATCAAATCAGAGGGCTCCAGTCATCCTCTCCATTGGAGGTGACAGTACTAAAAGGCCTGGTCTTTACAAAGGAGCTGCTATGTCTCCAACATTATCAGAGGAAGCTTGTTTCCAGCCACAGATGCTAAATGACATATACACTATCTAAGATGTATATAATGTCTAAGGTCAAAGCAACTGCTCCCAGAAACATTTGAGCTGTGGTGATCATGCGGGAAACTTTGAATCCGGACATTTGTTTGCGGATCTCTCTTCTTTTACCAAGAATGTTTATCTTAATCTACTATCTATGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02421189_02423360.mRNA True 963 mRNA 0.43 2 2421026 2423527

Neighbor

gene id symbol gene type direction distance location
CI01000034_02275470_02281951 CYB561 coding upstream 138422 2274601 ~ 2282604 (+)
CI01000034_02256162_02260170 NA coding upstream 160562 2255765 ~ 2260464 (+)
CI01000034_02231423_02231755 NA coding upstream 188902 2231303 ~ 2232124 (+)
CI01000034_01900645_01947187 RAPGEFL1 coding upstream 473839 1900645 ~ 1947187 (+)
CI01000034_01872601_01880795 CASC3 coding upstream 540231 1872601 ~ 1880795 (+)
CI01000034_02550332_02552258 NA coding downstream 126805 2550332 ~ 2552839 (+)
CI01000034_02563086_02564052 NA coding downstream 139411 2562938 ~ 2564172 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 238682 2662209 ~ 2665540 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 264418 2687945 ~ 2705564 (+)
CI01000034_02770255_02774341 NA coding downstream 346572 2770099 ~ 2774567 (+)
G169760 NA non-coding upstream 116928 2235008 ~ 2304098 (+)
G169768 NA non-coding upstream 161222 2243834 ~ 2259804 (+)
G169686 NA non-coding upstream 238881 2170179 ~ 2182145 (+)
G169692 NA non-coding upstream 254100 2166484 ~ 2166926 (+)
G169706 NA non-coding upstream 307694 2109522 ~ 2113332 (+)
G169906 NA non-coding downstream 52749 2476276 ~ 2477466 (+)
G169922 NA non-coding downstream 83118 2506645 ~ 2509031 (+)
G169921 NA non-coding downstream 86252 2509779 ~ 2510694 (+)
G169927 NA non-coding downstream 125107 2548634 ~ 2588029 (+)
G169946 NA non-coding downstream 165413 2588940 ~ 2589235 (+)
G169806 NA other upstream 83336 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 689849 1729413 ~ 1731179 (+)
G169340 NA other upstream 1110148 1250219 ~ 1310878 (+)
G169394 NA other upstream 1227466 1150297 ~ 1193560 (+)
G169357 NA other upstream 1302007 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1010609 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1701573 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1771111 4192311 ~ 4200636 (+)

Expression


Co-expression Network