CI01000034_02575638_02577407


Basic Information

Item Value
gene id CI01000034_02575638_02577407
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2575344 ~ 2577572 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02575638_02577407.mRNA
ACTTACCAACAAACACAACTTGTAAAGGATACACAATAATTCAGCAAGGTAAGCAGTCAAATTAGTGGCTTATAATTAATCAAATTATACTATATTGCTTGAAATTGATGAATCACGTTGCTTTAAACTCATACGCTCTCCGTTCCTTTAAAGGCATCTCTCAGAATGGACCTTCATCGTGTGGCTTGGCTGTGCACCTTTTTCTGCTTTGCGCAGGTCTGGTCTTTGCCAACAAACTGCATCCTTAGGAAGGACTTGATGGAGAAAACCCGTACATTTATAGAGACTGCGGGTGGCCTTTTCCCTTCGCAATGCCTGGACGACCACGTTTCCATATCTTTCCCCAAAAATGTGTTTGAGTCCAGTAACACGCTTCAGGTTACTGGTGTTGAAAAGGCTGTTTACCAGACACTCCAGAAAATTGACGCACTGTTTGAGAACTACAGTGCTCCAGACCAGTGGGATGAAGAAAAAATGACTGACTTTCAAGGCATCTTATACCGGCAGATTGAGGAGAGCAAATGCATCATGAGCAAGTCTGGAGCGGAAGAGGATTTTCCCAGCAGAGAAGCCTCTCTTAAGGTTTACTTCGAAGCTATATCCTCAACTCTGAAAGAAAAGGATTTCAGTTTCTGCGCATGGGAAATCGTGAGAAGTGAGATTCTCCGCACCCTGAACTTCATATTGAAGCACAACTCTGACATCATGTATGAATCTCCACAACCCTAGATGCTTGCCTGCATGCTTATTTATTTATTTATTTATTCATTCATTCATTCATTCATTCATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTCTTTGTGACTATAGAGGTGTATTCGCTTTCTATGCCTGATCACTGTAACGGAAATAACTGTCACTTTCACTTTTGATTTTGATTGTTACATCATTTCCATTCAGCACTGGACAGTTCACAATTTGAACACCTCTTTATTCATACATTCAGAATGTTGTATTTTTGTATGTTTTTTGTAATTACTTAATAAA

Function

NR:

description
IFNc3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02575638_02577407.mRNA True 1023 mRNA 0.38 5 2575344 2577572

Neighbor

gene id symbol gene type direction distance location
CI01000034_02513892_02532734 ARHGAP27L coding downstream 42610 2513878 ~ 2532734 (-)
CI01000034_02510595_02511512 NA coding downstream 63832 2510061 ~ 2511521 (-)
CI01000034_02459679_02504620 WNK4B coding downstream 70322 2459679 ~ 2505022 (-)
CI01000034_02295276_02337198 TANC2A, TANC2 coding downstream 238146 2295276 ~ 2337198 (-)
CI01000034_02182977_02213069 HDAC5 coding downstream 362275 2182964 ~ 2213069 (-)
CI01000034_02581924_02584745 NA coding upstream 4007 2581579 ~ 2584745 (-)
CI01000034_02585852_02587541 GH1 coding upstream 8060 2585632 ~ 2587541 (-)
CI01000034_02596578_02625089 SCN4AB coding upstream 18597 2596169 ~ 2625407 (-)
CI01000034_02673701_02680445 NA coding upstream 95949 2673521 ~ 2680753 (-)
CI01000034_02712912_02755978 KANSL1B coding upstream 135115 2712687 ~ 2755978 (-)
G171890 NA non-coding downstream 31575 2543163 ~ 2543769 (-)
G171841 NA non-coding downstream 146800 2403093 ~ 2428544 (-)
G171849 NA non-coding downstream 409910 2163267 ~ 2165434 (-)
G171867 NA non-coding downstream 479036 2095850 ~ 2096308 (-)
G171860 NA non-coding downstream 500438 2074696 ~ 2074906 (-)
G171907 NA non-coding upstream 11972 2589544 ~ 2589761 (-)
G171937 NA non-coding upstream 92584 2670156 ~ 2670385 (-)
G171939 NA non-coding upstream 93283 2670855 ~ 2671069 (-)
G171926 NA non-coding upstream 102106 2679678 ~ 2735927 (-)
G171920 NA non-coding upstream 188518 2766090 ~ 2774240 (-)
G171835 NA other downstream 129051 2441821 ~ 2446293 (-)
G171755 NA other downstream 708971 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 1257090 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 1498122 1062444 ~ 1083413 (-)
G172016 NA other upstream 657391 3234963 ~ 3236615 (-)
G172151 NA other upstream 813941 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 1588927 4165373 ~ 4172272 (-)
CI01000034_04216451_04218876 NA other upstream 1638640 4216212 ~ 4221881 (-)
G172593 NA other upstream 2415388 4992960 ~ 4994943 (-)

Expression


Co-expression Network