CI01000034_02673701_02680445


Basic Information

Item Value
gene id CI01000034_02673701_02680445
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2673521 ~ 2680753 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02673701_02680445.mRNA
AGTGGCCAGTTTTCAATAAGGCATGACATTGATTCAGTGATGCGTGTTAAACGTGATGCTATGTAACCTGTCAGTGGTCCTGGTGTGGTGAGGATTGTCCGTTTTTCTGCTAAACTGACTCGACTTTTGCTCATTCAATTGGAAAAATGGCCATCTGTCAAACCCCACACACCAGATACCAGGAGTTGGGGGGGGGGTGTGCAACAACTTGATGACATGGCGATCCATAACTTTGTGTAACCTCATGTATGTCTGTTTCTGTAATTAGGCCTTGTCGGTAAATGTACAGCCCTTAGCAAGGGCAGAAAATGAGGCAAACATCCTGCTGGCCTAGAGAATGTGAAGAAAGTGCAGACGTTTACAGATCCCAGCTGATACAATTAAAGGAGAAATCAATGGAGCGGCCGACTTCAATAAATATAGGCCAAACAACAAACAGAAGAAAACCTGAGCTCCAGCACTGGGCAACAGGATCAGTGAGGATGATGGCTGCATGTCTCCACGTGCCAAATTCTGGCCGACTTGAAATAATGTTCATGCTGCCAGACGAAATTGCTGCTGATAACAGCATGATCCACTTAGCATATGAAAATATTCAGTCCCCGAAAAGGACGGCTGGCATTTACGTGAACATGTGTCGTACAGATGCTGGCAAGAAGAGTAAAATAGTCTCCCAGACAAAAGCACCATGTGGCGTTACAAAGATAAGGGAGAGCCTTGCAGATTCTATAAGTAACCATGACAAACCATCCACATGCAACATCAGCACCATTTTCAACAGAGAGCAAACTGCGAAAATCCCTTTACACCGGAGGATCAGCGACATGTCGAGTCCGTTTATCGCTTTCAGACTGATCAGGTCCGCGTGCAAAAGCCGCAAAAATCCCGATTATCGATTTGTCATTCGTTATGACCACAAAATACCTTTAGAAAAACCTGGCACTTTTCATCCAGACAGTCTTAGCACACCGGCGTGAGCCACATTATGCTCCATCAGTCTCATACTTCTAGGTTTTTCCACACCGGCAAACCGCGTGCGCGTGAAGCATTGCATGCGTCTATCGCCACACTGCCTCGAGATTTCTACGATACAATGCACCTCATCCAAAAAAAAAAAAAAAAAAAAAGGAATTTAATATTCTTTGAATGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02673701_02680445.mRNA True 1157 mRNA 0.44 5 2673521 2680753

Neighbor

gene id symbol gene type direction distance location
CI01000034_02596578_02625089 SCN4AB coding downstream 48114 2596169 ~ 2625407 (-)
CI01000034_02585852_02587541 GH1 coding downstream 85980 2585632 ~ 2587541 (-)
CI01000034_02581924_02584745 NA coding downstream 88776 2581579 ~ 2584745 (-)
CI01000034_02575638_02577407 NA coding downstream 95949 2575344 ~ 2577572 (-)
CI01000034_02513892_02532734 ARHGAP27L coding downstream 140787 2513878 ~ 2532734 (-)
CI01000034_02712912_02755978 KANSL1B coding upstream 31934 2712687 ~ 2755978 (-)
CI01000034_02778206_02786310 CDC27 coding upstream 96947 2777700 ~ 2786310 (-)
CI01000034_02875948_02953386 CRHR2, CRHR1 coding upstream 194905 2875658 ~ 2954520 (-)
CI01000034_03247806_03248810 NA coding upstream 567041 3247794 ~ 3248947 (-)
CI01000034_03250695_03253982 NA coding upstream 569649 3250402 ~ 3254202 (-)
G171939 NA non-coding downstream 2452 2670855 ~ 2671069 (-)
G171937 NA non-coding downstream 3136 2670156 ~ 2670385 (-)
G171907 NA non-coding downstream 83760 2589544 ~ 2589761 (-)
G171890 NA non-coding downstream 129752 2543163 ~ 2543769 (-)
G171841 NA non-coding downstream 244977 2403093 ~ 2428544 (-)
G171920 NA non-coding upstream 85337 2766090 ~ 2774240 (-)
G171927 NA non-coding upstream 95187 2775940 ~ 2776384 (-)
G171946 NA non-coding upstream 114405 2795158 ~ 2795444 (-)
G171947 NA non-coding upstream 118158 2798911 ~ 2799189 (-)
G171960 NA non-coding upstream 164476 2845229 ~ 2845621 (-)
CI01000034_02510595_02511512 NA other downstream 162000 2510061 ~ 2511521 (-)
G171835 NA other downstream 227228 2441821 ~ 2446293 (-)
G171755 NA other downstream 807148 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 1355267 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 1596299 1062444 ~ 1083413 (-)
G172016 NA other upstream 554210 3234963 ~ 3236615 (-)
G172151 NA other upstream 710760 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 1485746 4165373 ~ 4172272 (-)
CI01000034_04216451_04218876 NA other upstream 1535459 4216212 ~ 4221881 (-)
G172593 NA other upstream 2312207 4992960 ~ 4994943 (-)

Expression


Co-expression Network