CI01000034_02875948_02953386 (CRHR2, CRHR1)


Basic Information

Item Value
gene id CI01000034_02875948_02953386
gene name CRHR2, CRHR1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2875658 ~ 2954520 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02875948_02953386.mRNA
TAATCAAGTGTTTCTGACTAACTGGATTTATCTGCTTTATGTGTCTGTGGTAACCTTAGTGATACTAATTGAGAGTCTTGACGAAGAGAAGTTTAAGAGTCATTTAACAAGCTGACCTTTGAACATTGCCTGTTGTTTTACAAGGGGCTGTTTGTGTTTGTATCAGGATGGGTCAAGAGCTTTGTCATTTATTGCTGATCTCCAGAAGATTGTTGGATAGAAAGCACAATTCTTTAATTTTGACAGTTGAAATTAATTTAATGAAAATACATAAATTAAATGATAAAAACCTCATACTCTTTCAATTACTAGGGAGTTTTCATTTAGAATACTGATCCAAATAACTAGTAATTCTTTCTGAAGGATTTGGTAATACTTGAGTCATTACTAGTGGGTTACCATTACCTTCACTTTAAAATTAATTATACACTATGCATTATTCACATTAATTATGAACCAGTATATAGTAATTCTTAGTAGTCCTCTGGGAGGTATGAAAAAATAGCAGTTATTGATTAGCTAATAGTGAACTACCTCATTCAACTGAGAGTTATTAGTTTCAACATTATTTGTTCTTCAGACATTTCTCTTTAAAAGAAAAAAATATCAGCTCTATGCAAAGTGGTTTTCAACCACTAAAATTGTGTACAATTTACCAATTTATTAATGGAGCCACATTAAGATCTTCATATCTCTGGGAATGAACCATATAGGGCAGGGGTGCCCAATAGGTCGATCGCAAAGACATTGCTGGTAGATCGCACACAATTTTAATAAATGCTTTTGTTAAATTTTAATAAAAAGAAATATAACAATGTTCTTCCTTCTCTTTTTAGTTTCTATCTGACTTGCATTTGACTAATAAATTTTGATGAGGTTTTTGTTTATTCAGTTGCCATGACAACTAGTCTGCTTCGCGCCTTCCAAGAGCTTCAGAGTTCGGAAAACAGAGCGTGAAGTCAGCTTCCTCCAAATACGCATGAAAGTGAGCGTGCACGTATTGAGCAGACGATTTTCATGGACGTATCCATGATCTCTTTCATGTTCAGCATTTTCGCACATAGAGCTTGTTGGTGTATAATACAATGATAATTAAAGAAGTTGGGAAACGTATCCTCCTCCTTGTACTTGGCAATGAATCCGTTTGAATGGCCAACCATCGCAGCTCGCACTTTCATCCTATGGAACCAGACGTCTAGTCCCACCAACTCTACAGGTTTGTTTTGTAATACTTCGATTGATGGCATTGGGACATGCTGGCCCAGGAGCAGTGCTGGAGAAGTGGTGTCCCGCCCCTGTCCGGAAACTTTCCTCGGGGTCCGATACAACACCACCAATAATGTGTACAGAGAATGTCTTGCTAATGGCACCTGGGCAAAGAAGGGAAACTACTCCCAATGTCAGGAAATCCTCAACGAGGAGACTCAAAACATATTTTTGAAAACTAAGTTTGGAAGAGCCAGAGGTAGTCTGGGGATTGATTTAAGCAGTAAAAAGCCACTTACCTATGAGCCAAAAACATACAAACTGAATCACAGAAGTAGCATACAGCAGTCCAGTGTCTCAGAAATAATACGATTTCAATTTGAAACATTAAAGGAATCACCACAGGCAGAGTGCAACAAGTTAATGAAGGCCAGTGACCGGTTCAGGCCCTCTGAGGCACTCATGTCTAAAGACGCTCTTAATCCAATTGCACAATTTAATCATTACCTTCAGATGTTTAATGAGCCACAAAATTTTGAGGTGCTAAGAATGCTGAACCCTCATGGTCTCTCAACACAAGAAAGCACTCTACAGAGGAAAGTGCAACAAGAGGGCATCGACAATGCGTCTTCCATTGCCTACAAGCTCCCTGCGGGGTCCAAGAAAAGCAAGCTGCATTACCACATTGCAGTCATCATAAACTACCTGGGACACTGTATCTCTCTGGGAGCCCTGCTGGTCGCCTTCATCCTCTTTATGAGACTCAGGAGTATCCGGTGTCTGAGAAATATCATCCACTGGAACCTGATTACGGCATTTATCCTGCGAAATGCCACCTGGTTTGTGGTGCAGCTCACCATGAATCCAGAGGTGCATGAGAGCAATGTGATCTGGTGCAGGCTGGTCACAGCAGCGTATAATTATTTCCATGTGACCAACTTCTTCTGGATGTTTGGAGAGGGCTGCTATCTGCACACAGCCATAGTACTGACATACTCCACAGACAAACTGAGGAAATGGATGTTCATCTGTATAGGCTGGTGTATTCCATTCCCCATTATCGTCGCGTGGGCCATTGGCAAGCTGTACTATGACAATGAAAAGTGCTGGTTTGGGAAGCGGGCCGGCATTTACACTGATTATATTTACCAAGGTCCCATGATCCTGGTCCTACTGATTAACTTCATTTTTCTCTTCAACATTGTGAGGATCCTGATGACTAAACTGAGGGCCTCCACTACCTCAGAGACCATTCAGTACAGGAAAGCAGTAAAGGCCACACTGGTTCTTCTGCCCCTGCTAGGCATCACATACATGCTGTTCTTCGTCAACCCTGGCGAGGATGAGATCTCACAGATTGTCTTCATATACTTCAACTCTTTCCTAGAGTCCTTTCAGGGATTCTTTGTGTCAGTGTTCTACTGCTTTTTGAACAGTGAGGTTCGCTCAGCCGTTCGTAAACGATGGCATCGCTGGCAGGATAAGCACTCCATTCGGGCACGGGTGGCGCGGGCCATGTCTATACCCACCTCTCCAACGCGGGTCAGTTTCCACAGCATCAAGCAGTCGTCGGCTGTCTGACCTTAATAGAAGCGAAGCGCCCGTCCCCGTTTCTTCTGCTTCTGCTCTTTCTGTCCTCAGCAAATCATCCATGTCCTCTGCAAAACCCAGGGATAACAGCTATGGGCCAAACAGGGTATGATCCTCAGCTGAAACATAGATGAAGGGTGGAAAATACACAAACAATGAGGTCCACCTGCCGAACACAGTGAAGAAGAATCTGTTTCAGAAACAGATTAGAGCATCGGTGGTCTCAGACAATGATGGGAGACTGTGGGAGGAATCTGACGCACACAAAAAAGGTCAATAAA

Function

symbol description
crhr1 Predicted to enable corticotrophin-releasing factor receptor activity; corticotropin-releasing hormone binding activity; and peptide receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection and plasma membrane. Is expressed in griseum centrale and hindbrain. Human ortholog(s) of this gene implicated in asthma; chronic obstructive pulmonary disease; and obesity. Orthologous to several human genes including LINC02210-CRHR1 (LINC02210-CRHR1 readthrough).
crhr2 Human ortholog(s) of this gene implicated in asthma. Orthologous to human CRHR2 (corticotropin releasing hormone receptor 2).

NR:

description
corticotropin releasing factor receptor 1

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04578 CRHR1; corticotropin releasing hormone receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02875948_02953386.mRNA True 3077 mRNA 0.42 15 2875658 2954520

Neighbor

gene id symbol gene type direction distance location
CI01000034_02778206_02786310 CDC27 coding downstream 89348 2777700 ~ 2786310 (-)
CI01000034_02712912_02755978 KANSL1B coding downstream 119680 2712687 ~ 2755978 (-)
CI01000034_02673701_02680445 NA coding downstream 194905 2673521 ~ 2680753 (-)
CI01000034_02596578_02625089 SCN4AB coding downstream 250251 2596169 ~ 2625407 (-)
CI01000034_02585852_02587541 GH1 coding downstream 288117 2585632 ~ 2587541 (-)
CI01000034_03247806_03248810 NA coding upstream 293274 3247794 ~ 3248947 (-)
CI01000034_03250695_03253982 NA coding upstream 295882 3250402 ~ 3254202 (-)
CI01000034_03255619_03266388 NA coding upstream 300748 3255268 ~ 3267690 (-)
CI01000034_03285980_03289258 NA coding upstream 331270 3285790 ~ 3289258 (-)
CI01000034_03577874_03611044 NA coding upstream 622934 3577454 ~ 3611099 (-)
G171960 NA non-coding downstream 30037 2845229 ~ 2845621 (-)
G171947 NA non-coding downstream 76469 2798911 ~ 2799189 (-)
G171946 NA non-coding downstream 80214 2795158 ~ 2795444 (-)
G171927 NA non-coding downstream 99274 2775940 ~ 2776384 (-)
G171920 NA non-coding downstream 101418 2766090 ~ 2774240 (-)
G172048 NA non-coding upstream 190084 3144604 ~ 3144832 (-)
G172022 NA non-coding upstream 197361 3151881 ~ 3171535 (-)
G172031 NA non-coding upstream 235392 3189912 ~ 3190509 (-)
G172020 NA non-coding upstream 256186 3210706 ~ 3214094 (-)
G172025 NA non-coding upstream 272839 3227359 ~ 3231997 (-)
CI01000034_02510595_02511512 NA other downstream 364137 2510061 ~ 2511521 (-)
G171835 NA other downstream 429365 2441821 ~ 2446293 (-)
G171755 NA other downstream 1009285 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 1557404 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 1798436 1062444 ~ 1083413 (-)
G172016 NA other upstream 280443 3234963 ~ 3236615 (-)
G172151 NA other upstream 436993 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 1211979 4165373 ~ 4172272 (-)
CI01000034_04216451_04218876 NA other upstream 1261692 4216212 ~ 4221881 (-)
G172593 NA other upstream 2038440 4992960 ~ 4994943 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025273 crhr1 coding NC_007114.7 CM002887.2 21669545 ~ 21889616 (+)
bowfin (Amia calva) AMCG00016726 LOC105890724,LOC107754311,LOC108413653,LOC108261365,LOC107694956 coding CM030122.1 CM030122.1 28477514 ~ 28492616 (-)