CI01000034_03285980_03289258


Basic Information

Item Value
gene id CI01000034_03285980_03289258
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3285790 ~ 3289258 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_03285980_03289258.mRNA
GTTCTCTCTGCCAGTTAGATGTATGTGGTCAAGCTCCCCTCAACAACAAGATTGTTGGAGGAGAAAATGCAGCGGCAGGGTCGTGGCCGTGGCAAGTCAGCATTCAAAATGTCAAGTCTGGCCATTTTTGTGGCGGGAGTCTGATTAATAAAGACTGGGTTTTGTCTGCTGCTCACTGCTTCCAGAGCTTCTCCATATCTGACCTTGAGATCTACCTAGGACTTCGGAGCCAATCAGGCTCAGACCCTAATAAGATAAAGAGTACAGTGAGTCAAGTCATTAACCATCCTAACTATAACAATCCTAGCGATGACAACGACATAGCCCTGCTCCAGCTCTCTTCCTCCGTGACTTTCTCTGATTATATTAAGCCAGTCTGTCTGGCTGCTGCTGGTAGTACATTTGGTGCAGGTACAGAGAGCTGGGTCACTGGATGGGGCACGTTAACATCTGGAGGCACCCAGGCTCCTGACATACTGCAGGAGGTGATGATACCAATTGTGAGCAACAGTGACTGTAATAATGCTTATGGAGGTGGCATCACAAGCAATATGATTTGTGCTGGATTGTTAAATCAGGGAGGGAAAGATGCATGTCAGGGAGACTCTGGAGGTCCAATGGTCAGTAGGAACGGCTCCGTGTGGATTCAGTCTGGCATTGTGAGTTTTGGTATAGGATGTGCTGACCCCAAATATCCTGGTGTGTACGCCCGAGTGTCTCGGTACCAGGATTGGATCAACTCTAAGATAACCAGCAACCAGCCTGGATTTGTCGAATTCAATTCCAATGGATTCAGAAGCTCACCTAACCTGCTTTTATTTTCAATTTCTCTCACATTCTCCATTATTCCTTTCATATGCTCCGTATTTCTCTCTTCATAGAGATTATTTGAATGACAATACTCAGGGTTCTTTGATTAAAAGGACAATTGTACTGTACAAGTTCTCATAGGCGAAGAGAGCAGGTATATGGTTATGCTGTCATTTATTCTTTATCATTTAAAAATATACTAATCTTGGAAAGCTACTCTTATGATTGAGTTTTTACATTTAAAGATTGTGCATTAATAAA

Function

NR:

description
Zgc:101788

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_03285980_03289258.mRNA True 1071 mRNA 0.44 5 3285790 3289258

Neighbor

gene id symbol gene type direction distance location
CI01000034_03255619_03266388 NA coding downstream 18100 3255268 ~ 3267690 (-)
CI01000034_03250695_03253982 NA coding downstream 31588 3250402 ~ 3254202 (-)
CI01000034_03247806_03248810 NA coding downstream 36843 3247794 ~ 3248947 (-)
CI01000034_02875948_02953386 CRHR2, CRHR1 coding downstream 331270 2875658 ~ 2954520 (-)
CI01000034_02778206_02786310 CDC27 coding downstream 499480 2777700 ~ 2786310 (-)
CI01000034_03577874_03611044 NA coding upstream 288196 3577454 ~ 3611099 (-)
CI01000034_03659420_03661699 NXPH3 coding upstream 370032 3659290 ~ 3661699 (-)
CI01000034_03803160_03827982 NGFRA coding upstream 513574 3802832 ~ 3827982 (-)
CI01000034_03911480_03913846 TMUB2 coding upstream 621817 3911075 ~ 3913846 (-)
CI01000034_03915853_03921269 ASB16 coding upstream 626493 3915751 ~ 3921269 (-)
G172092 NA non-coding downstream 20027 3265473 ~ 3265763 (-)
G172090 NA non-coding downstream 21125 3264443 ~ 3264665 (-)
G172088 NA non-coding downstream 23754 3261833 ~ 3262036 (-)
G172016 NA non-coding downstream 50443 3234963 ~ 3236615 (-)
G172019 NA non-coding downstream 52078 3233519 ~ 3233712 (-)
G172122 NA non-coding upstream 14769 3304027 ~ 3304263 (-)
G172030 NA non-coding upstream 35226 3324484 ~ 3325211 (-)
G172021 NA non-coding upstream 39552 3328810 ~ 3330494 (-)
G172147 NA non-coding upstream 98374 3387632 ~ 3387869 (-)
G172148 NA non-coding upstream 98744 3388002 ~ 3388238 (-)
CI01000034_02510595_02511512 NA other downstream 774269 2510061 ~ 2511521 (-)
G171835 NA other downstream 839497 2441821 ~ 2446293 (-)
G171755 NA other downstream 1419417 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 1967536 1311529 ~ 1312780 (-)
G172151 NA other upstream 102255 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 877241 4165373 ~ 4172272 (-)
CI01000034_04216451_04218876 NA other upstream 926954 4216212 ~ 4221881 (-)
G172593 NA other upstream 1703702 4992960 ~ 4994943 (-)
G172800 NA other upstream 2499774 5789032 ~ 5789738 (-)

Expression


Co-expression Network