CI01000034_03432846_03437608 (NDUFA4, NDUFA4L)


Basic Information

Item Value
gene id CI01000034_03432846_03437608
gene name NDUFA4, NDUFA4L
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3432846 ~ 3438839 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_03432846_03437608.mRNA
ATGATAGTAGTTCTGAAAGTTGTGGTAGTTCAAAGTAAGATACCTAAAATCGCTGCAGATAACACTAAAGTGTGCGTGCAAACTCGCAAACTGACCCTAGATCAGACTCAGCGACCAGTGTTGATCCCACTATTTATTTTCATTGGCGGTGGATGTACCATGTCTCTTTCATATCTGGCTCGCCTGGCAATGCGCAACCCTGATGTCTGCTGGGACAAAAAGAACAACCCAGAGCCTTGGAATAAACTGGGTCCCAATGATCAGTACAAGTTCTTCTCAGTGAACATGGACTACAGCAAGCTGAAGAAGGACCGTCCTGACTACTAAACGCATCCAGAGAATCCAGATGCCCAGTGCCTGACCAAAGGCTTAAAAATCAAACTAAAGAACAACAAGATGTCCACACACTTTTCCTCAATGGCCCTTGTTCCTATATTAATTTATGCAAAGAGACTAAATTACACAGATGTTGTCTTTGCTTATCTGGATCCTTTTTAACATCTATGATGTCTTGTGTATTTTCTTCCCATACTTTTTAGTCAGAGACGATTA

Function

symbol description
ndufa4 Involved in positive regulation of cytochrome-c oxidase activity. Located in mitochondrion. Part of mitochondrial respiratory chain complex I and mitochondrial respiratory chain complex IV. Implicated in cytochrome-c oxidase deficiency disease.

GO:

id name namespace
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG:

id description
K03948 NDUFA4; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_03432846_03437608.mRNA False 552 mRNA 0.42 5 3432846 3437833

Neighbor

gene id symbol gene type direction distance location
CI01000034_03422028_03431218 SLC35B1, S35B1 coding upstream 1250 3421289 ~ 3431596 (+)
CI01000034_03407574_03419313 FAM117A, FAM117AA coding upstream 13455 3405952 ~ 3419391 (+)
CI01000034_03396650_03402951 NA coding upstream 29712 3396650 ~ 3403134 (+)
CI01000034_03373181_03385238 FAM57B, FAM57BA, FAM57BB coding upstream 46788 3372527 ~ 3386058 (+)
CI01000034_03358125_03363411 NA coding upstream 68810 3355709 ~ 3364036 (+)
CI01000034_03533995_03552021 SPOP coding downstream 96162 3533995 ~ 3552105 (+)
CI01000034_03556390_03566045 NA coding downstream 116792 3554625 ~ 3566525 (+)
CI01000034_03656686_03659087 NA coding downstream 218853 3656686 ~ 3659172 (+)
CI01000034_03670122_03684523 NA coding downstream 232110 3669943 ~ 3685216 (+)
CI01000034_03855726_03858565 NA coding downstream 417718 3855551 ~ 3859311 (+)
CI01000034_03273191_03285382 NA non-coding upstream 135623 3272420 ~ 3294805 (+)
G170280 NA non-coding upstream 149674 3281406 ~ 3283172 (+)
G170276 NA non-coding upstream 172810 3259782 ~ 3260036 (+)
G170274 NA non-coding upstream 174777 3257790 ~ 3258069 (+)
G170244 NA non-coding upstream 183716 3245746 ~ 3249130 (+)
G170305 NA non-coding downstream 138594 3576427 ~ 3576638 (+)
G170328 NA non-coding downstream 159845 3597678 ~ 3597877 (+)
G170330 NA non-coding downstream 160869 3598702 ~ 3598939 (+)
G170332 NA non-coding downstream 162171 3600004 ~ 3600216 (+)
G170336 NA non-coding downstream 165181 3603014 ~ 3603228 (+)
G169806 NA other upstream 1095156 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 1701669 1729413 ~ 1731179 (+)
G169340 NA other upstream 2121968 1250219 ~ 1310878 (+)
G169394 NA other upstream 2239286 1150297 ~ 1193560 (+)
G169357 NA other upstream 2313827 1053543 ~ 1119019 (+)
CI01000034_04125435_04125780 RPRML other downstream 687267 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 756805 4192311 ~ 4200636 (+)

Expression


Co-expression Network